| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2720 |
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| Symbol | |
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| ID | 4688677 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 2866831 |
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| End bp | 2867658 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639835728 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_982943 |
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| Protein GI | 121605614 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.591331 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.119727 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTCGC CTTCTTCACT TCATGCCCTC GTCACCGGCG CCACAGGCGG AATTGGCCGG
GGCATCTGCC TTGCGCTGAT CGAGCAGGCG CGCAAGGACG GCGCGGCCAT CCACATTGCA
GCCGCCGCCT CGCAGTCCGG CGACAAACTG GAAAGCCTGC TTGGTGAATT AAGGGCGGCC
GGCGCCACCG CCAGCGGCGT GACCGGCGAC ATCACCGACC CGGCCCAGTG CGCCGCCCTG
GTGGCCCAGG CGCAAGCCAG CGGCGGCGAC CTGACGGCGC TGGTCTGCAA CGCCGGCGCT
TCCGGCCCCG GCCAACTCGC CGATTTGCCG GTCGCCCAGT GGGACACCAC CTTCAACCTC
AACACCCGCT CGGCCTGGCT GCTGGCGCAG GCGGCCCGTG ACTCGCTGGC GCGCACGCGC
GGCAGCATCA CCGCGATTGC CTCGATGTCG GGCTTGACGC CGCACCCCGG CTATGGCGCC
TACTCGGCGG CCAAGGCAGC GCTGATCATG CTGTGCCGCC AGCTGGCGCA GGAATGGGCG
GCCGACGGCA TCCGCGTCAA CACCGTCTGC CCCGGCATGA TCCGCACGCC GCTGACCGAA
GCGGTGTACC AGGATGCGGA CACGCTTTTG AAACGGCAAG CGCTGGTGCC GCTGGGCCGC
ATCGGCCGGG CCGAAGACGT GGGCGCAGCG GTGGCTTTTC TGGCCAGCGC GGGCGCAAGC
TACATCACCG GCCAGAACCT GGTCGTGGAC GGCGGCATTT CGGACCACAT GCTGGCGATG
ATTCCGGGCC GGCCCGGGAA GCCGCCGGTG GGGCTGGTGG GCGGCTGA
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| Protein sequence | MTSPSSLHAL VTGATGGIGR GICLALIEQA RKDGAAIHIA AAASQSGDKL ESLLGELRAA
GATASGVTGD ITDPAQCAAL VAQAQASGGD LTALVCNAGA SGPGQLADLP VAQWDTTFNL
NTRSAWLLAQ AARDSLARTR GSITAIASMS GLTPHPGYGA YSAAKAALIM LCRQLAQEWA
ADGIRVNTVC PGMIRTPLTE AVYQDADTLL KRQALVPLGR IGRAEDVGAA VAFLASAGAS
YITGQNLVVD GGISDHMLAM IPGRPGKPPV GLVGG
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