| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2710 |
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| Symbol | |
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| ID | 4689028 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 2857641 |
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| End bp | 2859347 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639835718 |
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| Product | putative succinate dehydrogenase |
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| Protein accession | YP_982933 |
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| Protein GI | 121605604 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.228165 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.454137 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCACGAG ATATTGAATG CGACCTGCTG GTCGTCGGCT CCGGCGCTGC CGGCCTGGCC
ACGGCCATCA CCGCCAAGAA ACGCGGCCTG GACGTGGTGG TGATCGAGAA AGAACCCGTG
TTTGGCGGCA CCACCGCGCT GTCCGGCGGC GTGCTGTGGA TTCCGCTGGG GCCGCATGGC
CGCAAGCAGA ATCCGGCCGA CACCCGCGAG GCGGTTCGCA GCTACATGAT GCAGGAGACC
GGCGCGTTCT ACGACGAGGC GGCGGTTGCG GCCTTCCTCG ACAACGGGCC GAAGATGGTC
GAGTTCTTCG AGCGCGAGAC GGCGATGAAA TTCATCCCGA CGATGTACCC CGACTACCAC
CCCGACATGC CGGGCGGCGC GAGCATCGGT CGCTCCATCC TGGCCGAGCC GTATGACATT
CGCGGCCTGG GCAAGGACAT GGCGCGGCTC AAGCTACCGC TCAAGACCAT CACCTTCATC
GGCATGATGT TCAACTCGTC GAATGCCGAT TTGAAGCATT TCTTCCAGGT CACCAAGTCG
CTGACCTCTT TTCTCTACGT GGCGAAACGG CTGGCGAACC ACCTGAAGGA AATGGCGCTG
TACCGCCGCG CCATCAACGT GACCAGCGGC AATGCGCTGG CCGCGCGCCT GGCCCAGTCG
GCCCTTAGCT TGGGCATCCC GATTTTGACC AGCAGCCCGG CCAGGGAAAT CATCATGGAC
CAGGGCCGGG CCGTCGGCGC GCGCATTGCC AGCGCTGAAG GCGACTACCG CATCACCGCC
CGGCAGGGCG TGGTGCTGGC CTGCGGCGGT TTTCCGCAGG ACATCCAGCG CATCGCCAAG
GCCTATCCGC ATTTGCAGCG CGGCGGCGAG CACCTGTCGC CCACGCCGCT GGGCAACACC
GGCGACGGCA CGCGCATGGC CGAAGCGCTA GGCGGCGTGG TCGATATCCG CTTCAAGGAC
GCCGCCGCCT GGATGCCGGT GTCGAAGGTA CCTTATGGCA ACGGCGAGTT CGGCGTGTTT
CCACACCTGC TGGACCGCTA CAAGCCGGGC ATCATCGGCG TGCTTCGGTC GGGCAAGCGC
TTTACCAACG AGTCCAATTC CTACCATGAC GTGGGCGCGG CATTGACGCG CGCCTGCGAA
GGCCAGAAGG ACACGGCGAT GTGGCTGATC TGCGACAAGG CCACCATGGG CAAGTACGGA
CTGGGCTATG CCAAGCCTGC TCCGATGCCG CTGGGCGGCC TGATCCGCAA CGGCTACCTG
ATCAAGGGCG ACACGCTGGC TGAACTGGCG AAAAACGCCG GCATCGACCC GGCCGGACTG
GAAGCCACCG TGCGCAACTA CAACGTAGGC GCCGTCAAGG GTCAGGATCC GGCCTTCGGG
CGCGGCCGCA CGGCTTTCAA CCGCTACCTG GCCGACCCCG AGAACAAGCC AAATCCCTGC
GTCGCGCCGA TCCAGAGCGG GCCTTATTAC GCGGTCAAGG TCGTCATGGG CGACCTCGGC
ACCTTCGACG GCATCAAGAC CAGCGTGGTC GGCGAAGTGC TCAAACGCGA CGGCACGGCC
ATCGCCGGCC TGTATGCCGT GGGCAACGAC CGCGCCAGCA TCATGGGCGG CAACTACCCC
GGCGCCGGCA TCACCCACGG GCCGAACATG ACGTTTGGCT ACATCACCGC CCACCACATC
GCCGACAAGG CAGGAGTTCC CGCATGA
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| Protein sequence | MSRDIECDLL VVGSGAAGLA TAITAKKRGL DVVVIEKEPV FGGTTALSGG VLWIPLGPHG
RKQNPADTRE AVRSYMMQET GAFYDEAAVA AFLDNGPKMV EFFERETAMK FIPTMYPDYH
PDMPGGASIG RSILAEPYDI RGLGKDMARL KLPLKTITFI GMMFNSSNAD LKHFFQVTKS
LTSFLYVAKR LANHLKEMAL YRRAINVTSG NALAARLAQS ALSLGIPILT SSPAREIIMD
QGRAVGARIA SAEGDYRITA RQGVVLACGG FPQDIQRIAK AYPHLQRGGE HLSPTPLGNT
GDGTRMAEAL GGVVDIRFKD AAAWMPVSKV PYGNGEFGVF PHLLDRYKPG IIGVLRSGKR
FTNESNSYHD VGAALTRACE GQKDTAMWLI CDKATMGKYG LGYAKPAPMP LGGLIRNGYL
IKGDTLAELA KNAGIDPAGL EATVRNYNVG AVKGQDPAFG RGRTAFNRYL ADPENKPNPC
VAPIQSGPYY AVKVVMGDLG TFDGIKTSVV GEVLKRDGTA IAGLYAVGND RASIMGGNYP
GAGITHGPNM TFGYITAHHI ADKAGVPA
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