Gene Pnap_2687 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2687 
Symbol 
ID4689873 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2830433 
End bp2831308 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content67% 
IMG OID639835695 
Productalpha/beta hydrolase fold 
Protein accessionYP_982910 
Protein GI121605581 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.646881 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTTGC CATCAATGAT TGATCAACCC GCTGAAGTGC AACGCCTCCT GCAAAGCGCC 
ACCCGTTTGA CAACGCCTTG TGGCGGTGGC GACCTGGTCT GGCATGCCTG GGGCCAGGCA
GCGTGCAATC CTGCCTTGGC GCCGCTCGTT CTACTGCATG GCGGCAGCGG CAGCTGGACG
CACTGGCTGC GCAACATCGA GGCGCTGGCC GAATCCGGTC GCTGGGTGCT GGTGCCCGAT
TTGCCCGGCT TTGGCGACTC CGCCGCTCCC CTGCACGGCA CGGACGCCGA CGCGATTCCA
GAACCGTTTG AGCAGGGGCT GCAGTGCCTG CTGGGCGAAC AGGCCTGCGA TCTGGTGGGG
TTTTCCTTTG GCGGCATGGT GGCCGGTTTG GTGGCGGCGC AATTTCCGGC GCGGGTGGCG
CGGCTGGTTC TGGTCGGCGC GCCGGGCCTG GGAATCGCGC CGGAAAAAGC CGTCCGGCTC
AATGCCTGGC GGCATTTGCC CGAGGCCGGC CGGCGCGATG AAGTGCACCG AAGCAACCTG
GCGGCGCTGA TGCTCTGTCA CCCCGAGTCC ATCACCGAAA CGGCCTTGCG CCTGCATGTG
GCGAACGTGC TGCGCGACCG CATGAAAGGC CGCAGCCTGT CGCGCACCGA TGCGCTGGCG
CAGGCGCTTT TAAAGGTGCA ATGCCCGGTG CATGCCATCT ACGGCGCTGA AGACGCGCTT
TACCGGGGAA AGATGCAGGC ACTGGAGCCG GCGCTGCGGC TGGCGCCCGG TTTCAGGGCG
CTGACGCTGG TTGAAGACGC CGGGCACTGG GTCCAGTTTG AGCGGGCCGA AGCCTTTGAC
GCGGCGCTGC TGTCCACGCT CAACGCAGCC TTGTAG
 
Protein sequence
MTLPSMIDQP AEVQRLLQSA TRLTTPCGGG DLVWHAWGQA ACNPALAPLV LLHGGSGSWT 
HWLRNIEALA ESGRWVLVPD LPGFGDSAAP LHGTDADAIP EPFEQGLQCL LGEQACDLVG
FSFGGMVAGL VAAQFPARVA RLVLVGAPGL GIAPEKAVRL NAWRHLPEAG RRDEVHRSNL
AALMLCHPES ITETALRLHV ANVLRDRMKG RSLSRTDALA QALLKVQCPV HAIYGAEDAL
YRGKMQALEP ALRLAPGFRA LTLVEDAGHW VQFERAEAFD AALLSTLNAA L