| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2666 |
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| Symbol | |
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| ID | 4689109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 2807062 |
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| End bp | 2808801 |
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| Gene Length | 1740 bp |
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| Protein Length | 579 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639835674 |
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| Product | dihydroxy-acid dehydratase |
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| Protein accession | YP_982889 |
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| Protein GI | 121605560 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.37627 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCCTA CCCCAAAACG TCCGCTGCGA TCCCAAGAAT GGTTTGGCTC GGCAGACAAG
AACGGCTTCA TGTACCGCAG CTGGATGAAG AACCAGGGCA TCCCGGACCA TGAGTTCCAG
GGCAAGCCCA TCATTGGCAT CTGCAACACC TGGTCGGAGC TGACCCCGTG CAATGCCCAT
TTCCGCAAAA TCGCCGAGCA TGTCAGGCGT GGCGTGTTCG AGGCCGGCGG CTTTCCGGTC
GAGTTCCCGG TGTTTTCCAA TGGCGAGTCC AATTTGCGGC CGACGGCCAT GTTCACCCGC
AACCTGGCCA GCATTGATGT GGAAGAGTCC ATCCGGGGCA ATCCGATTGA CGCCGTGGTA
CTGCTGGCCG GCTGCGATAA AACCACCCCC GCCTTGCTGA TGGGCGCGGC CAGTTGCGAC
ATTCCCGCCA TCGTGGTCAG TGGCGGGCCG ATGCTCAACG GCAAGCACCA GGGCAAGGAT
ATTGGATCGG GCACGGTCGT CTGGCAGCTG CATGAAGCGG TCAAGGCCGG GCACATCAGC
ATGCATGAAT TCATGTCCGC CGAAGCCGGC ATGTCGCGCT CGGCCGGCAC CTGCAACACC
ATGGGAACCG CCTCCACCAT GGCTTGCATG GCCGAGGCGC TGGGCACCTC GTTGCCGCAT
AACGCCGCCA TTCCGGCGGT TGACGCGCGG CGCTATGTGT TGGCCCATAT GTCCGGCATG
CGCATCGTCG AAATGGCCCT GGAAGACCTT CGCCTGTCGA AAATCCTGAC GCGGGAAGCC
TTCGAGAACG CCATCCGGGT CAATGCCGCC ATTGGCGGAT CGACCAATGC GGTGATCCAT
CTGAAGGCGA TTGCCGGACG GCTGGGAATT CCGCTGGAAC TGGAGGACTG GACGAGCATC
GGCCGCGGCA CGCCGACCAT CGTGGACCTG ATGCCCTCGG GCCGCTTTTT GATGGAAGAC
CTGTACTACG CCGGCGGCCT GCCTGCCGTG CTGCGCCGCA TGGGCGAAGC CGATCTGCTG
CGGCATCCGG GCGCGCTGAC CGTCAACGGA AAGTCACTCT GGGAAAACGT GCGCGAAGCA
CCGATCTACA ACGACGAGGT GATTCGTCCG CTGGCCAAGC CGCTGATCGA GGACGGCGCC
ATCTGCATCC TGCGCGGCAA CCTGGCGCCG CGCGGCGCGG TCCTGAAACC GTCGGCGGCC
TCGCCGCACC TGATGCAGCA CCGTGGCCAG GCGGTGGTTT TCGAAGACTT CGACCATTAC
AAATCACGCA TCAACGATCC GGACCTTGAG GTTGACGCGA ACTCGGTGCT GCTGATGAAA
AACTGCGGCC CCAAAGGCTA CCCCGGCATG GCGGAGGTCG GCAACATGGG CTTGCCGCCC
AAGCTGCTGG CGCAAGGCGT GACCGACATG GTCCGCATTT CGGATGCCCG CATGAGCGGC
ACCGCCTACG GCACCGTGGT GCTGCATGTG GCGCCCGAAG CCGCAGCCGG CGGACCGCTG
GCCATTGTGC GCGATGGCGA CTGGATTGAA CTCGATTGCG CAGGGGGGCG CCTGCATCTG
GAAATCGATG AGGCTGAAAT GGCGGCCAGG TTTGAAAACC TGCAAGCCAG GAAGCCGCCA
GAGCGCACGG GCGGCTACCG GGAGCTGTAC ATCGACCATG TCCTGCAGGC CGACCAGGGC
TGCGACTTCG ACTTTCTGCT CGGATGCCGG GGTGCGGAGG TTCCGCGTCA TTCCCATTAA
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| Protein sequence | MSPTPKRPLR SQEWFGSADK NGFMYRSWMK NQGIPDHEFQ GKPIIGICNT WSELTPCNAH
FRKIAEHVRR GVFEAGGFPV EFPVFSNGES NLRPTAMFTR NLASIDVEES IRGNPIDAVV
LLAGCDKTTP ALLMGAASCD IPAIVVSGGP MLNGKHQGKD IGSGTVVWQL HEAVKAGHIS
MHEFMSAEAG MSRSAGTCNT MGTASTMACM AEALGTSLPH NAAIPAVDAR RYVLAHMSGM
RIVEMALEDL RLSKILTREA FENAIRVNAA IGGSTNAVIH LKAIAGRLGI PLELEDWTSI
GRGTPTIVDL MPSGRFLMED LYYAGGLPAV LRRMGEADLL RHPGALTVNG KSLWENVREA
PIYNDEVIRP LAKPLIEDGA ICILRGNLAP RGAVLKPSAA SPHLMQHRGQ AVVFEDFDHY
KSRINDPDLE VDANSVLLMK NCGPKGYPGM AEVGNMGLPP KLLAQGVTDM VRISDARMSG
TAYGTVVLHV APEAAAGGPL AIVRDGDWIE LDCAGGRLHL EIDEAEMAAR FENLQARKPP
ERTGGYRELY IDHVLQADQG CDFDFLLGCR GAEVPRHSH
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