Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_2638 |
Symbol | |
ID | 4689727 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 2780837 |
End bp | 2781871 |
Gene Length | 1035 bp |
Protein Length | 344 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639835645 |
Product | ApbE family lipoprotein |
Protein accession | YP_982861 |
Protein GI | 121605532 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.489922 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGACGTC GAACATTCAT TTCGGCCTCC GTGGGTAGTG CTGCGGCCGG TTTGGCAGGC TGGGAATTTA TTCAATCCAG CACCAAGGCC GGCTCGCTGA CCCGAAGCGA TGAGCTTCCA TCCGGCCAAA GACTGTACGC CGGAGCCGGC CTGGCATTTG GGACCACCAT CAAGGTCAAG TTGCTGCACA AGGATCAGCG CCAGGCCGAA CTGGCCATTG AGGATGCCTT CCATGAAGCG AAAAAGATTG ACACCTTGAT GAGTATCCAT AGCGAAAACA GCCAGGTTTT TCGATTGAAC AGGGATGGCC GGCTTCAGAC GCCGGACCCG CATCTGCTGC TTGTGCTTGA ACAGGCCAGA AGGCTCTCGG TCCTGACTGA CGGGGCGTTC GATATCACGG TTCAGCCCCT TTGGTCGAAA TTCAATCAAG CCGCTGCCAG GCATTCCTTG CCATCGAGTG AGGAAAGATT AAATGCCAGG TCTTTGGTCA ACTGGAAAAA TCTGCGCTTT ACGCAGGATC AGGTCAGCTT CCAGCAATCG GGCATGGCCA TTACCTTGAA TGGCATCGCA CAAGGCTATG CGGCCGACCT GGCGCTGTCG GCGGTTCGGG CCAGAGGCGT AGAGCATGCG CTGCTGGACA CCGGAGAGTT CATATCGAGC GGAACCAGAA CGCCTGGCCG TGATTGGGTA TTGGGCGTGC AGAACCCCAG GCAGACGGAT GAATATAAAA CCGCGCTGCA AATGGACGGG CGCAGCGTGG CGACCTCGGG AGATTACGAA ACGGCCTTCA CGCCGGATTT CGTGCATCAC CACATCTTTG ACCCTGCCAC GGGAGATTCT CCTCTTGAGC TGGCAAGCGT GACCGTCGTC GCCCCCACGG GCTTATTGGC CGATGGACTG TCCACGGCGT TATTTGTCAT GGGGCCAGAC AAGGCGATGG CCCTTGCCGC GCAACTGGAC CGGGTCGATG TTTTTCTTGT GGATAAAAAG GGAAAAGTCT GGAAAACAAC TGGTTTGCAC GAATTGCGCG CGTGA
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Protein sequence | MRRRTFISAS VGSAAAGLAG WEFIQSSTKA GSLTRSDELP SGQRLYAGAG LAFGTTIKVK LLHKDQRQAE LAIEDAFHEA KKIDTLMSIH SENSQVFRLN RDGRLQTPDP HLLLVLEQAR RLSVLTDGAF DITVQPLWSK FNQAAARHSL PSSEERLNAR SLVNWKNLRF TQDQVSFQQS GMAITLNGIA QGYAADLALS AVRARGVEHA LLDTGEFISS GTRTPGRDWV LGVQNPRQTD EYKTALQMDG RSVATSGDYE TAFTPDFVHH HIFDPATGDS PLELASVTVV APTGLLADGL STALFVMGPD KAMALAAQLD RVDVFLVDKK GKVWKTTGLH ELRA
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