Gene Pnap_2631 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2631 
Symbol 
ID4689838 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2771720 
End bp2772796 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content65% 
IMG OID639835638 
Productspermidine/putrescine ABC transporter ATPase subunit 
Protein accessionYP_982854 
Protein GI121605525 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID[TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACCA ATCCAATCCT GGTGAGCTTC TCCGGCGTCC AGAAAACCTA TGACGGCATC 
AACCTCGTGG TGCGCGACCT GAACCTGGAT ATCCGGCAAG GCGAATTCTT GTCCCTGCTC
GGTCCCTCGG GCTCGGGCAA GACCACCACA TTGATGATGC TGGCCGGCTT CGAGTCGCCC
ACGGCGGGCG AGATCATGCT GGACGGCCGG CAGATCACCC GTACGCCGCC GCACAAGCGC
AACTTCGGCA TGGTGTTCCA GAACTACGCC TTGTTCCCGC ACATGACGCT GGCCGAAAAC
ATCGCCTATC CGCTCACGGT GCGCAAGCTG CCCAAGGCCG AACGTGAAGC CAAGGTGCTC
AAGGCGCTGG ACATGGTGCA GCTCGGCCGC ATGGGCAGCC GCTACCCCGG CCAGCTCTCG
GGCGGCCAGC AGCAGCGCGT GGCCCTGGCC CGGGCGCTGG TGTTCGACCC GCAGCTGGTG
CTGATGGACG AGCCCCTGGG CGCGCTGGAC AAGCAGCTGC GCGAGCACAT GCAGATCGAA
CTCAAGGCGC TGCACCGCCG CCTGGGCGTG ACCTTTGTCT ATGTCACCCA CGACCAGACC
GAGGCGCTGA CCATGTCCGA CCGCGTCGCC GTGTTCAGCG ACGGCGCGAT CCAGCAGATC
GATGTGGTGG ACAGCCTGTA TGAAACGCCG GCCAACCGCT TCGTCGCCGG CTTTGTCGGC
GACAGCACGG TGTTGCAGGC CGAAGTGACG CGGCTGGACG GCGCGCATTG CGAGGTTCGC
CTGCCCAGCG GCGTGCAGCT GCGCGGGCTG AATGTCAATG CCGCCGCTGT CGGCGATGCG
GTGCAATGTG GCACCCGCCC GGAGCGGCTG AAAATTGCCG ACGCGCCCGG CGCCAACACC
TTCCAGAGCC AGGTGCTGGA CGTGATTTAC TTTGGCGACC ATTTGCGCCT GCGCTGCGAA
ATGCCCGGCC AGCCTGACGC CACCATCAAG ATGCCACTGG GCCACCACCA GTTGCCCGAG
CCCGGCCAGA CCATTCATGT GCATGCACCG GTTGAACACC TGCGTATTTA CCGCTGA
 
Protein sequence
MTTNPILVSF SGVQKTYDGI NLVVRDLNLD IRQGEFLSLL GPSGSGKTTT LMMLAGFESP 
TAGEIMLDGR QITRTPPHKR NFGMVFQNYA LFPHMTLAEN IAYPLTVRKL PKAEREAKVL
KALDMVQLGR MGSRYPGQLS GGQQQRVALA RALVFDPQLV LMDEPLGALD KQLREHMQIE
LKALHRRLGV TFVYVTHDQT EALTMSDRVA VFSDGAIQQI DVVDSLYETP ANRFVAGFVG
DSTVLQAEVT RLDGAHCEVR LPSGVQLRGL NVNAAAVGDA VQCGTRPERL KIADAPGANT
FQSQVLDVIY FGDHLRLRCE MPGQPDATIK MPLGHHQLPE PGQTIHVHAP VEHLRIYR