| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2627 |
|---|
| Symbol | |
|---|
| ID | 4690035 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | + |
|---|
| Start bp | 2765226 |
|---|
| End bp | 2766086 |
|---|
| Gene Length | 861 bp |
|---|
| Protein Length | 286 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639835634 |
|---|
| Product | ethanolamine ammonia-lyase small subunit |
|---|
| Protein accession | YP_982850 |
|---|
| Protein GI | 121605521 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4302] Ethanolamine ammonia-lyase, small subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.358649 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACACGA AAGTTTCACC CGTCACCGCC AATCCGTGGG AAACCCTGCG CCAGTTCACC
GATGCCCGCA TCGCGCTCGG CCGGGCCGGT GTGAGCCTGC CAACGGCAGC GCACCTGGCG
TTTCAACTCG CCCATGCGCA GGCGCGCGAC GCGGTTCTGG TGGCGCTCGA TGTGCCGGGT
CTGAGTCAAT CGCTCAACGC GGTATCGGGA AAACAGACTT GCCTGAGCCT GCACAGCGCC
GCCGCCGACC GCACCGTTTA TCTGCAGCGG CCCGATCTGG GCCGCCGGCT TGACGACGCT
TCCCGCGAAA CCCTGGAGGG ATTGAAACCT GCCGGCCCGG AGCCTTCCGT TCGTCTCTAC
GACCTGGCCT TCGTGGTGGT CGATGGCCTG TCAGCCTTGG CCATCGAGCA AAATGCAGCG
CCCTTCCTGA GCGTGCTTCA GCGCCGGATC GCCGCTGAAA ACTGGTCCGT CGCGCCGCTG
TGCATCGTCA GCCAGGGGCG GGTCGCCATT GGCGACGAAG TCGGCGAACT GCTGGGCGCC
AAGGCCGTCG TGGTGCTGAT CGGCGAACGG CCGGGCCTGA GTTCGCCCGA CAGCATGGGC
CTGTACCTGA CCTGGATGCC CCGCGTCGGA TTGCTCGACG ACAGCCGCAA CTGCATTTCC
AACGTGCGCC CTGCCGGCCT GCGCTACGAG GAAGCCGCCT ACAAGCTGCA TTATTTGTTG
TCGCAGGCCC GCCAGCGGCA ACTGACCGGC GTGGACCTCA AGGACGAAGC GCTGGCTGAC
CCGGAACGGC TCAGGGTCAG CGAGAAAAAT TTCCTGCTCG ACCATTCGCG CACGCCCGGC
GCTTCCGGGT CGCAGGCTTG A
|
|---|
| Protein sequence | MNTKVSPVTA NPWETLRQFT DARIALGRAG VSLPTAAHLA FQLAHAQARD AVLVALDVPG
LSQSLNAVSG KQTCLSLHSA AADRTVYLQR PDLGRRLDDA SRETLEGLKP AGPEPSVRLY
DLAFVVVDGL SALAIEQNAA PFLSVLQRRI AAENWSVAPL CIVSQGRVAI GDEVGELLGA
KAVVVLIGER PGLSSPDSMG LYLTWMPRVG LLDDSRNCIS NVRPAGLRYE EAAYKLHYLL
SQARQRQLTG VDLKDEALAD PERLRVSEKN FLLDHSRTPG ASGSQA
|
|---|
| |