Gene Pnap_2623 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2623 
Symbol 
ID4690174 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2759782 
End bp2761035 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content63% 
IMG OID639835630 
Producthypothetical protein 
Protein accessionYP_982846 
Protein GI121605517 
COG category[S] Function unknown 
COG ID[COG4301] Uncharacterized conserved protein 
TIGRFAM ID[TIGR03438] probable methyltransferase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCTGA AAAAAATGGG GCACGCCAGC GAAACCGGCT TCGCATCCCG CCTTGTGCGG 
CCCCGCAAAG GTCTGAAAGC TATTGTGCCA CCATGCACCC TGGCGCCAAA ACGTCCGCAA
AACCGGGTCT GCGGCAGCCG CCTCAAACGA TGTAGTCCTA CAGGCGCCCT GCCGAAACCG
TTTTTAAATC AGGTGTTTCC AGTACCACCG CCAAGGCCGC CCTTGAAACT CCACGACACT
CTTTTTGACC TGCCGCTGGC CACGCCGCCG GTCCCGACGC CCCGGTTCTA CAACCTGTGC
CCCCAGGATT CGCCAGGCCG GCAAGCCCGC ACCGTCACAG GGGAACTCAC CGAAGGGCTG
ATGGCTGAAG CGGCCAGCGT GTCGCCGAAG TTTTTCTACA ACCCGCTGGG CTCCAGGCTG
TTTGAAGCCA TCACGGCGCT GGACGAGTAC TACCCGACAC GCACCGAGGC CGCAATCTTT
GAAGCGGCTT CCAGGCAGAT GGCCCGGACG CTGGCGGAAC ATGGCTTGAG CCATCCGTGC
CTGATTGACC TGGGCGCGGG AAACTGCGCC AAGGCGATGG CCCTGATTCC CCATCTTCAC
CCGCGCCAGT ACGTGCCGGT CGATATTTCG GTGGATTTTT TGCGCGATGC CGCCGCACAG
TTGCAGCACC GTTTTCCGGC GCTCGACATC GTGGGCGTCG GCATGGATTT TTCGGCCGGC
CTGGCCTTGC CCGATGCGGT CCAGGAGCGT GACCGGGTGT TTTTCTACCC CGGCTCCAGC
CTTGGCAATT TCCAGCCGGC GCAGGCGCTG GCGTTTTTGC GGCACATGGC CGATCCGGCA
CGGGGCAAGG CGCGCGGCCT GCTGCTGGGC ATCGACCTGG TCAAGGACAG GGCCACGCTC
GAAGCGGCCT ATGACGATGC GCTGGGCGTG ACGGCGGCCT TCAACAAAAA CCTGCTCCTG
AACGTCAACG ATTTGCTGGC GGCGGATTTC GACGTGCGGC AATGGCGGCA TGTCGCGCTG
TTCAATGCCG CGCAGTCGCG CATCGAGATG CACCTGCAAG CGCTGTGCAA CCTGACAGCC
CGCTGGCCGG GCCACTCGCG TCGCTTCCTG GCGGGCGAGC GGATTCACAC CGAAAGCTCC
TACAAATACA CGGCAGAGAG CATGACGGCC CTGCTGAAGC AGGCCGGATT CAGGCACATC
AGGCACTGGA GCGACCCGCA GGACTGGTTT GCCGTGTTCT GGGCGGCGGT TTAG
 
Protein sequence
MMLKKMGHAS ETGFASRLVR PRKGLKAIVP PCTLAPKRPQ NRVCGSRLKR CSPTGALPKP 
FLNQVFPVPP PRPPLKLHDT LFDLPLATPP VPTPRFYNLC PQDSPGRQAR TVTGELTEGL
MAEAASVSPK FFYNPLGSRL FEAITALDEY YPTRTEAAIF EAASRQMART LAEHGLSHPC
LIDLGAGNCA KAMALIPHLH PRQYVPVDIS VDFLRDAAAQ LQHRFPALDI VGVGMDFSAG
LALPDAVQER DRVFFYPGSS LGNFQPAQAL AFLRHMADPA RGKARGLLLG IDLVKDRATL
EAAYDDALGV TAAFNKNLLL NVNDLLAADF DVRQWRHVAL FNAAQSRIEM HLQALCNLTA
RWPGHSRRFL AGERIHTESS YKYTAESMTA LLKQAGFRHI RHWSDPQDWF AVFWAAV