Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_2623 |
Symbol | |
ID | 4690174 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 2759782 |
End bp | 2761035 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639835630 |
Product | hypothetical protein |
Protein accession | YP_982846 |
Protein GI | 121605517 |
COG category | [S] Function unknown |
COG ID | [COG4301] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR03438] probable methyltransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATGCTGA AAAAAATGGG GCACGCCAGC GAAACCGGCT TCGCATCCCG CCTTGTGCGG CCCCGCAAAG GTCTGAAAGC TATTGTGCCA CCATGCACCC TGGCGCCAAA ACGTCCGCAA AACCGGGTCT GCGGCAGCCG CCTCAAACGA TGTAGTCCTA CAGGCGCCCT GCCGAAACCG TTTTTAAATC AGGTGTTTCC AGTACCACCG CCAAGGCCGC CCTTGAAACT CCACGACACT CTTTTTGACC TGCCGCTGGC CACGCCGCCG GTCCCGACGC CCCGGTTCTA CAACCTGTGC CCCCAGGATT CGCCAGGCCG GCAAGCCCGC ACCGTCACAG GGGAACTCAC CGAAGGGCTG ATGGCTGAAG CGGCCAGCGT GTCGCCGAAG TTTTTCTACA ACCCGCTGGG CTCCAGGCTG TTTGAAGCCA TCACGGCGCT GGACGAGTAC TACCCGACAC GCACCGAGGC CGCAATCTTT GAAGCGGCTT CCAGGCAGAT GGCCCGGACG CTGGCGGAAC ATGGCTTGAG CCATCCGTGC CTGATTGACC TGGGCGCGGG AAACTGCGCC AAGGCGATGG CCCTGATTCC CCATCTTCAC CCGCGCCAGT ACGTGCCGGT CGATATTTCG GTGGATTTTT TGCGCGATGC CGCCGCACAG TTGCAGCACC GTTTTCCGGC GCTCGACATC GTGGGCGTCG GCATGGATTT TTCGGCCGGC CTGGCCTTGC CCGATGCGGT CCAGGAGCGT GACCGGGTGT TTTTCTACCC CGGCTCCAGC CTTGGCAATT TCCAGCCGGC GCAGGCGCTG GCGTTTTTGC GGCACATGGC CGATCCGGCA CGGGGCAAGG CGCGCGGCCT GCTGCTGGGC ATCGACCTGG TCAAGGACAG GGCCACGCTC GAAGCGGCCT ATGACGATGC GCTGGGCGTG ACGGCGGCCT TCAACAAAAA CCTGCTCCTG AACGTCAACG ATTTGCTGGC GGCGGATTTC GACGTGCGGC AATGGCGGCA TGTCGCGCTG TTCAATGCCG CGCAGTCGCG CATCGAGATG CACCTGCAAG CGCTGTGCAA CCTGACAGCC CGCTGGCCGG GCCACTCGCG TCGCTTCCTG GCGGGCGAGC GGATTCACAC CGAAAGCTCC TACAAATACA CGGCAGAGAG CATGACGGCC CTGCTGAAGC AGGCCGGATT CAGGCACATC AGGCACTGGA GCGACCCGCA GGACTGGTTT GCCGTGTTCT GGGCGGCGGT TTAG
|
Protein sequence | MMLKKMGHAS ETGFASRLVR PRKGLKAIVP PCTLAPKRPQ NRVCGSRLKR CSPTGALPKP FLNQVFPVPP PRPPLKLHDT LFDLPLATPP VPTPRFYNLC PQDSPGRQAR TVTGELTEGL MAEAASVSPK FFYNPLGSRL FEAITALDEY YPTRTEAAIF EAASRQMART LAEHGLSHPC LIDLGAGNCA KAMALIPHLH PRQYVPVDIS VDFLRDAAAQ LQHRFPALDI VGVGMDFSAG LALPDAVQER DRVFFYPGSS LGNFQPAQAL AFLRHMADPA RGKARGLLLG IDLVKDRATL EAAYDDALGV TAAFNKNLLL NVNDLLAADF DVRQWRHVAL FNAAQSRIEM HLQALCNLTA RWPGHSRRFL AGERIHTESS YKYTAESMTA LLKQAGFRHI RHWSDPQDWF AVFWAAV
|
| |