Gene Pnap_2617 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2617 
Symbol 
ID4690113 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2754928 
End bp2755980 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content66% 
IMG OID639835624 
Productdihydroorotate dehydrogenase 2 
Protein accessionYP_982840 
Protein GI121605511 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0167] Dihydroorotate dehydrogenase 
TIGRFAM ID[TIGR01036] dihydroorotate dehydrogenase, subfamily 2 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCTGC TCCCCTACGC CCTGGCCCGT CCCTTTTTAT TCGGACTTGA CCCCGAAACC 
GCCCACGAGC TGACCATGGC CTCGCTGGCG CGCACCCAGG GAACGCTGCT GTCGGCGGCC
TATTGCAGCA GCAAGGTCAG CGACCCCATC GAACTGGCCG GGCTGAAGTT TTCCAACCGC
GTGGGCCTGG CCGCCGGGCT GGACAAGAAT GCCCGCTGCA TCGACGGCCT GGCCGCGATG
GGCTTTGGCT TTGTCGAGGT CGGCACCGTG ACGCCCAAGG CCCAGCCCGG CAACCCCAAG
CCGCGCATGT TCCGCCTGCC CGAAGCGAAC GCGCTGATCA ACCGCCTGGG CTTCAACAAC
GACGGGCTGG ACGCCTTCCT GGCCAATGTG CGGAAATCCG CCGTTCGCCA GAAGAATGCG
AAAAACGCCC TGCTGCTCGG CCTGAACATC GGCAAGAACG CCGCCACGCC GATTGAAAAC
GCGGTGGACG ACTACCTGAT CTGCCTCGAT GGCGTGTACC CGCATGCCGA TTACGTCACC
GTCAACATCT CCAGCCCCAA CACCAAGAAC CTGCGCGCGC TGCAAAGCGA TGAAGCGCTG
GACGCCCTGC TCGGCCGCAT CGCCGAGCGC CGCGAAACCC TGGCCGGCCG GCACGGCAAG
CGCGTGCCGA TCTTCGTCAA GATCGCGCCC GACCTCGACG ACGCGCAGGT CGCGGTGATT
GCCACCACGC TCAAGCGCCA CGCCATGGAC GGCGTGGTGG CCACCAACAC CACGCTGAGC
CGCGACGCCG TCAAGGGCCT GCGCCATGCC GAGGAAGCCG GCGGCCTGAG CGGCGCGCCG
GTGTTAGAGG CCAGCAACCG CGTGATCGGC CAGCTGCGCG CCGCGCTGGG CAAAGGCTTT
CCCATCATCG GCGTGGGCGG CGTGATGAGC GGGCTGGACG CCGTGTCCAA GATCAAGGCG
GGCGCCGACG TGGTGCAGAT CTACACCGGC CTGATCTACA AAGGCCCGGC ACTGGTCGCC
GAAGCCGCAA ATTCGATCAA AAACAGCCGT TAG
 
Protein sequence
MSLLPYALAR PFLFGLDPET AHELTMASLA RTQGTLLSAA YCSSKVSDPI ELAGLKFSNR 
VGLAAGLDKN ARCIDGLAAM GFGFVEVGTV TPKAQPGNPK PRMFRLPEAN ALINRLGFNN
DGLDAFLANV RKSAVRQKNA KNALLLGLNI GKNAATPIEN AVDDYLICLD GVYPHADYVT
VNISSPNTKN LRALQSDEAL DALLGRIAER RETLAGRHGK RVPIFVKIAP DLDDAQVAVI
ATTLKRHAMD GVVATNTTLS RDAVKGLRHA EEAGGLSGAP VLEASNRVIG QLRAALGKGF
PIIGVGGVMS GLDAVSKIKA GADVVQIYTG LIYKGPALVA EAANSIKNSR