Gene Pnap_2616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2616 
Symbol 
ID4690109 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2754113 
End bp2754862 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content63% 
IMG OID639835623 
Productribose-5-phosphate isomerase A 
Protein accessionYP_982839 
Protein GI121605510 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0120] Ribose 5-phosphate isomerase 
TIGRFAM ID[TIGR00021] ribose 5-phosphate isomerase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTCTG ATTGTCGCAA AATCCCGCCT CGTCCCAACC CGATCCCCCA AACCTCTCCA 
AACCTCGCAA GGCACACCAT GACCCAAGAC GAACTCAAAA CCCTGGTCGG CCAGGCTGCG
CTGAATTATG TGGAAGCCGG CAGCATCGTC GGCGTCGGCA CCGGCTCCAC GGTCAACAAA
TTCATCGACG CGTTGGCGAC CATCAAAGAC CAGATTGCCG GCGCCGTGTC CAGCTCGAAC
GCCTCGACCG AGCGGCTGCA GGCGCTGGGC ATCAAGGTGT TCGATGCGAC CGAGGTGGAC
GAGCTGGGCG TCTATATTGA CGGCGCCGAC GAGATCGACC ACGCCGGCTA CATGGTCAAG
GGCGGCGGCG CGGCGCTGAC GCGCGAAAAA ATCGTCGCCG CGCAGTCGCG CAGGTTCATC
TGCATTGCCG ACAAGTCCAA ATACGTGGCC ACGCTGGGCG GCTTTCCCTT GCCGGTGGAA
ATCATTCCCA TGGCCACCCG GCGCATTGCG CGCCAGTTTG AAGCCATGGG CGGCGCGGCG
ACCGTGCGCC ACAAGGACGG CAAGCCGCTG GTGACCGACA ACGGCCAGCA CATCCTGGAC
GTGACCGGCC TGAAGATTGC CGACCCGCTG GCCTTCGAGT CCGAGGTCAG CCAGTGGCCC
GGCGTGGTGA CGGTAGGGGT GTTTGCGTTC CAGAAGGCCC ATGTGTGCCT GCTGGGAACG
GACGACGGGG TTGAAACCCT GGTGTTTTAA
 
Protein sequence
MSSDCRKIPP RPNPIPQTSP NLARHTMTQD ELKTLVGQAA LNYVEAGSIV GVGTGSTVNK 
FIDALATIKD QIAGAVSSSN ASTERLQALG IKVFDATEVD ELGVYIDGAD EIDHAGYMVK
GGGAALTREK IVAAQSRRFI CIADKSKYVA TLGGFPLPVE IIPMATRRIA RQFEAMGGAA
TVRHKDGKPL VTDNGQHILD VTGLKIADPL AFESEVSQWP GVVTVGVFAF QKAHVCLLGT
DDGVETLVF