Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_2616 |
Symbol | |
ID | 4690109 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 2754113 |
End bp | 2754862 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639835623 |
Product | ribose-5-phosphate isomerase A |
Protein accession | YP_982839 |
Protein GI | 121605510 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0120] Ribose 5-phosphate isomerase |
TIGRFAM ID | [TIGR00021] ribose 5-phosphate isomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTTCTG ATTGTCGCAA AATCCCGCCT CGTCCCAACC CGATCCCCCA AACCTCTCCA AACCTCGCAA GGCACACCAT GACCCAAGAC GAACTCAAAA CCCTGGTCGG CCAGGCTGCG CTGAATTATG TGGAAGCCGG CAGCATCGTC GGCGTCGGCA CCGGCTCCAC GGTCAACAAA TTCATCGACG CGTTGGCGAC CATCAAAGAC CAGATTGCCG GCGCCGTGTC CAGCTCGAAC GCCTCGACCG AGCGGCTGCA GGCGCTGGGC ATCAAGGTGT TCGATGCGAC CGAGGTGGAC GAGCTGGGCG TCTATATTGA CGGCGCCGAC GAGATCGACC ACGCCGGCTA CATGGTCAAG GGCGGCGGCG CGGCGCTGAC GCGCGAAAAA ATCGTCGCCG CGCAGTCGCG CAGGTTCATC TGCATTGCCG ACAAGTCCAA ATACGTGGCC ACGCTGGGCG GCTTTCCCTT GCCGGTGGAA ATCATTCCCA TGGCCACCCG GCGCATTGCG CGCCAGTTTG AAGCCATGGG CGGCGCGGCG ACCGTGCGCC ACAAGGACGG CAAGCCGCTG GTGACCGACA ACGGCCAGCA CATCCTGGAC GTGACCGGCC TGAAGATTGC CGACCCGCTG GCCTTCGAGT CCGAGGTCAG CCAGTGGCCC GGCGTGGTGA CGGTAGGGGT GTTTGCGTTC CAGAAGGCCC ATGTGTGCCT GCTGGGAACG GACGACGGGG TTGAAACCCT GGTGTTTTAA
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Protein sequence | MSSDCRKIPP RPNPIPQTSP NLARHTMTQD ELKTLVGQAA LNYVEAGSIV GVGTGSTVNK FIDALATIKD QIAGAVSSSN ASTERLQALG IKVFDATEVD ELGVYIDGAD EIDHAGYMVK GGGAALTREK IVAAQSRRFI CIADKSKYVA TLGGFPLPVE IIPMATRRIA RQFEAMGGAA TVRHKDGKPL VTDNGQHILD VTGLKIADPL AFESEVSQWP GVVTVGVFAF QKAHVCLLGT DDGVETLVF
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