Gene Pnap_2611 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2611 
Symbol 
ID4690067 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2747862 
End bp2749790 
Gene Length1929 bp 
Protein Length642 aa 
Translation table11 
GC content62% 
IMG OID639835618 
ProductATP-dependent metalloprotease FtsH 
Protein accessionYP_982834 
Protein GI121605505 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0465] ATP-dependent Zn proteases 
TIGRFAM ID[TIGR01241] ATP-dependent metalloprotease FtsH 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.728917 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAATAATC AGTGGTTTTC TAAAATTGCA ATCTGGCTGG TCATCGCCAT GGTGCTGTTC 
ACCGTGTTCA AGCAGTTTGA TACACGCGGC GGCGCAGGCT CGAATTACCT GGGCTACTCC
GAGTTCCTCG AAGAGGTTCG CGGCAAGCGC ATCAAGGCGG CAACCATCGC GGAAGGCCAG
GGCGGCACTG AAATCATCGC CACCACGACC GACGACCGAA AAATCCGCAC GACGGCAACC
TACCTTGACC GTGGCCTGGT CGGCGACCTG ATCGCCAACG ACGTGAAGTT CGACGTCAAG
CCGCGCGAAG AAGGTTCCCT GCTCATGACG CTGCTGGTCA GTTGGGGTCC GATGCTGCTG
CTGATTGGCG TGTGGGTGTA TTTCATGCGG CAGATGCAGG GCGGCGGCAA GGGCGGCGCG
TTCAGCTTTG GCAAATCCAA GGCGCGCATG CTCGACGAAT CGACCAATAC CGTGACCTTT
GCCGACGTTG CCGGTTGCGA CGAAGCGAAG GAAGAAGTCA AGGAAGTCGT CGATTTCCTG
AAAGACCCGG CCAAGTTCCA GAAACTCGGC GGCCGCATCC CCCGCGGCCT GCTGCTGGTC
GGCCCTCCGG GCACCGGCAA GACCCTGCTG GCCAAGGGCA TCGCCGGCGA AGCCAAGGTT
CCCTTCTTTT CGATTTCCGG TTCCGATTTC GTTGAAATGT TTGTCGGCGT GGGCGCTGCC
CGGGTGCGCG ACATGTTCGA CAACGCCAAG AAAAATGCGC CGTGCATCAT CTTCATCGAT
GAAATCGACG CCGTCGGCCG CCAGCGTGGC GCTGGCGTGG GCGGCGGCAA TGACGAGCGC
GAACAGACCC TGAACCAGAT GCTGGTCGAG ATGGACGGCT TTGAAACCAA TGTCGGCGTG
ATCGTGGTGG CGGCCACCAA CCGTCCCGAC ATTCTGGATG CCGCCTTGCT GCGCCCCGGC
CGTTTTGACC GCCAGGTCTA TGTCACGCTG CCCGACATTC GTGGCCGCGA ACAGATCCTC
AATGTCCACA TGCGCAAGGT TCCGCTCGGC CAGGACGTGA ACGCCAGCGT GATCGCACGC
GGCACGCCCG GCATGTCGGG TGCCGACCTG GCCAACCTGT GCAACGAAGC GGCCCTGATG
GCGGCGCGCC GCAATGCCCG CACGGTCGAG ATGCAGGACT TTGAAAAGGC CAAGGACAAG
ATCCTGATGG GTCCCGAGCG CAAGAGCATG GTCATGCCCG AGGAAGAGCG CCGCAACACG
GCCTACCACG AGTCCGGCCA CGCGCTGCTC GGCAAGATGC TGCCCAAGTG CGACCCGGTC
CACAAAGTCA CCATCATTCC GCGCGGCCGC GCCCTCGGCG TCACGATGAG CCTGCCGGCG
CAGGACCGCT ACAGCTACGA CCGCGAATAC ATGCTCAGCC AGATCAGCAT GCTGTTCGGT
GGCCGCATTG CCGAGGAAGT GTTCATGAAC CAGATGACCA CCGGCGCCAG CAACGACTTT
GAACGCGCCA CGGCACTGGC CAGAGACATG GTCACGCGCT ACGGCATGAC CGATGCGCTG
GGCCCCATGG TGTATGCCGA GAATGAAGGC GAAGTGTTCC TGGGCCGGTC GGTGACCAAG
ACCAACAACA TGAGCGAATC CACCTTGCAA AAGGTCGATA CCGAAGTGCG CCGCATCATC
GACCAGCAAT ACGCCCTGGC GCGCAAGCTG ATCGAGGACA ACAAGGACAA GATGCACGCG
ATGGCCAAGG CTTTGCTCGA ATGGGAAACC ATTGATGTCG AGCAGATGGA CGACATCATG
GCCGGCAAGG AGCCGCGTCC TCCCAAGGAC TGGACGCCGC GCAATCCGTC CGTTGGCGGT
GGCGGCGGCA ATGGCCCGAG CGGAGGCAGT CCTGCTGTCA CAACCGATCC GGCGCCTACC
GTGGCTTGA
 
Protein sequence
MNNQWFSKIA IWLVIAMVLF TVFKQFDTRG GAGSNYLGYS EFLEEVRGKR IKAATIAEGQ 
GGTEIIATTT DDRKIRTTAT YLDRGLVGDL IANDVKFDVK PREEGSLLMT LLVSWGPMLL
LIGVWVYFMR QMQGGGKGGA FSFGKSKARM LDESTNTVTF ADVAGCDEAK EEVKEVVDFL
KDPAKFQKLG GRIPRGLLLV GPPGTGKTLL AKGIAGEAKV PFFSISGSDF VEMFVGVGAA
RVRDMFDNAK KNAPCIIFID EIDAVGRQRG AGVGGGNDER EQTLNQMLVE MDGFETNVGV
IVVAATNRPD ILDAALLRPG RFDRQVYVTL PDIRGREQIL NVHMRKVPLG QDVNASVIAR
GTPGMSGADL ANLCNEAALM AARRNARTVE MQDFEKAKDK ILMGPERKSM VMPEEERRNT
AYHESGHALL GKMLPKCDPV HKVTIIPRGR ALGVTMSLPA QDRYSYDREY MLSQISMLFG
GRIAEEVFMN QMTTGASNDF ERATALARDM VTRYGMTDAL GPMVYAENEG EVFLGRSVTK
TNNMSESTLQ KVDTEVRRII DQQYALARKL IEDNKDKMHA MAKALLEWET IDVEQMDDIM
AGKEPRPPKD WTPRNPSVGG GGGNGPSGGS PAVTTDPAPT VA