Gene Pnap_2575 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2575 
Symbol 
ID4688538 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2710126 
End bp2710659 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content65% 
IMG OID639835583 
ProductISSod10, transposase OrfB 
Protein accessionYP_982799 
Protein GI121605470 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0505521 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000120768 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGGACATCT GGTTTCAAGA TGAAATGCGC ATTGGCCAGC GCGGCACGCA AACGCGCCTG 
TGGGCGCGCA AGGGAACGCG CCCCCGGGTG GTGCGCCAGC AGCAGTCCGA ATCGGCATAC
ATCTTTGGCG CAGTCTGTCC ACAGCAGGGT AGCGCGGTCG GTCTGGTCAT GCCGCACGCC
AATACCGAGG CAATGGCCCA TCACCTGCAG GCCCTGAGCG AGGCGGTGCC TGCGGGGCGC
CACGCGGTGC TGGTGCTCGA TCGTGCAGGG TGGCATACCA CCGCCAAACT GCCCCAGTTC
TCCAACCTCT CATTGCTGCC GCTGCCCGCG GGTTCACCCG AACTCAACCC GGCCGAGCAG
GTGTGGCAGC AACTGCGCGA CCGGCACCTG GCAAACCGTT GCTACGACAG CTACGAGCAG
ATCGTCGACG CCTGCTGCGA CGCCTGGAAT GCCTTCACGC AGATTCCTGG TGCCATCCGC
TCTTTGTGCT CCCGCCGCTG GGCCATGGTG CCTTCGGCAT CGGTAATGTC ATGA
 
Protein sequence
MDIWFQDEMR IGQRGTQTRL WARKGTRPRV VRQQQSESAY IFGAVCPQQG SAVGLVMPHA 
NTEAMAHHLQ ALSEAVPAGR HAVLVLDRAG WHTTAKLPQF SNLSLLPLPA GSPELNPAEQ
VWQQLRDRHL ANRCYDSYEQ IVDACCDAWN AFTQIPGAIR SLCSRRWAMV PSASVMS