Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_2575 |
Symbol | |
ID | 4688538 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 2710126 |
End bp | 2710659 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639835583 |
Product | ISSod10, transposase OrfB |
Protein accession | YP_982799 |
Protein GI | 121605470 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0505521 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.000120768 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | GTGGACATCT GGTTTCAAGA TGAAATGCGC ATTGGCCAGC GCGGCACGCA AACGCGCCTG TGGGCGCGCA AGGGAACGCG CCCCCGGGTG GTGCGCCAGC AGCAGTCCGA ATCGGCATAC ATCTTTGGCG CAGTCTGTCC ACAGCAGGGT AGCGCGGTCG GTCTGGTCAT GCCGCACGCC AATACCGAGG CAATGGCCCA TCACCTGCAG GCCCTGAGCG AGGCGGTGCC TGCGGGGCGC CACGCGGTGC TGGTGCTCGA TCGTGCAGGG TGGCATACCA CCGCCAAACT GCCCCAGTTC TCCAACCTCT CATTGCTGCC GCTGCCCGCG GGTTCACCCG AACTCAACCC GGCCGAGCAG GTGTGGCAGC AACTGCGCGA CCGGCACCTG GCAAACCGTT GCTACGACAG CTACGAGCAG ATCGTCGACG CCTGCTGCGA CGCCTGGAAT GCCTTCACGC AGATTCCTGG TGCCATCCGC TCTTTGTGCT CCCGCCGCTG GGCCATGGTG CCTTCGGCAT CGGTAATGTC ATGA
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Protein sequence | MDIWFQDEMR IGQRGTQTRL WARKGTRPRV VRQQQSESAY IFGAVCPQQG SAVGLVMPHA NTEAMAHHLQ ALSEAVPAGR HAVLVLDRAG WHTTAKLPQF SNLSLLPLPA GSPELNPAEQ VWQQLRDRHL ANRCYDSYEQ IVDACCDAWN AFTQIPGAIR SLCSRRWAMV PSASVMS
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