Gene Pnap_2572 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2572 
Symbol 
ID4687876 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2708202 
End bp2708609 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content66% 
IMG OID639835580 
Producthypothetical protein 
Protein accessionYP_982796 
Protein GI121605467 
COG category[R] General function prediction only 
COG ID[COG3193] Uncharacterized protein, possibly involved in utilization of glycolate and propanediol 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0331856 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000119045 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAAAACCA AAGCCGTGCT TGAACAGGCC GACATCAAAC TCATCGCCGC CGCCGCCGAG 
GCCGAAGCCC TGTCCAACAA CTGGGCCGTG ACCATCGCCA TCGTCGATGA CGGCGGCCAT
TTGCTGCACC TGCAGCGCCT CGATGGCGCG GCGGCCCTGA CGGCCCACAT TGCACCGGCC
AAGGCCAACA CCGCCGCCAT GGGCCGCCGC GAGAGCAAGT CGTATGAGGA CGTCATCAAC
GGCGGCCGCA CGTCATTCCT CTCGGCGCCT TATGTCCAGG GCATGCTCGA AGGCGGCGTG
CCCATCGTCA AGGACGGCCA GTGCATAGGC GCGGTCGGCG TCAGCGGCGT GAAGTCCACC
GAGGATGCGC AGATTGCCCG CGCCGGCATT GCCGCCATCG GCCTGTAA
 
Protein sequence
MKTKAVLEQA DIKLIAAAAE AEALSNNWAV TIAIVDDGGH LLHLQRLDGA AALTAHIAPA 
KANTAAMGRR ESKSYEDVIN GGRTSFLSAP YVQGMLEGGV PIVKDGQCIG AVGVSGVKST
EDAQIARAGI AAIGL