Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_2570 |
Symbol | |
ID | 4688146 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 2707397 |
End bp | 2707807 |
Gene Length | 411 bp |
Protein Length | 136 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639835578 |
Product | biopolymer transport protein ExbD/TolR |
Protein accession | YP_982794 |
Protein GI | 121605465 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0848] Biopolymer transport protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00988954 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.000963498 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCCTTCG GAACCCAGGA CGACACCGAT GAGGTGATGA ACGAGATCAA CATGACGCCG CTGGTCGATG TCATGCTGGT GCTGCTGATC ATCTTCATCA TCACCGTGCC GGTCATGAAG CATTCCGTCA ACATCGACCT GCCGCGCGCC AGCAACGAGC AGCAGCTCAT CAAGCCGGAA ACGGTCCGGC TCAGCGTCGA TGCCGATGGC AGCTATTACT TCAACGACGT GAAAATCACC GACGAGGAAC TGGCGCCCCG GCTGAAAGCG GCGGCCGCCC AGGAGCCGCA GCCCGACCTG CACATCCGGG GCGACAAGGC CGTTCGCTAC GAGCGCGTGG CGCAGGCCAT GGCGGCGGCG CAACAGGCCG GCGTGCGCAA GATCGGCTTC ATCACCGAAC CGAAGAACTG A
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Protein sequence | MAFGTQDDTD EVMNEINMTP LVDVMLVLLI IFIITVPVMK HSVNIDLPRA SNEQQLIKPE TVRLSVDADG SYYFNDVKIT DEELAPRLKA AAAQEPQPDL HIRGDKAVRY ERVAQAMAAA QQAGVRKIGF ITEPKN
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