Gene Pnap_2562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2562 
Symbol 
ID4687971 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2700819 
End bp2702246 
Gene Length1428 bp 
Protein Length475 aa 
Translation table11 
GC content68% 
IMG OID639835570 
Producthypothetical protein 
Protein accessionYP_982786 
Protein GI121605457 
COG category[C] Energy production and conversion 
COG ID[COG3488] Predicted thiol oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000435033 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATGGGAA TACGTTTTGC CGCCGCGCTG CTCTGCGCAA GCGCCAGTCT TGGAATGAGC 
CTCGGCATCG GCGCGGCCAG CCCGCCGGAC GATGAAAAAC CCGGCGGCGA CACCACCGTG
TTTGCCAGCG GGCGCAATGC CTTTTCGTTC CCGGCGGCCA ACCTGAGCGA CGAGGAGCGC
ACGCGCTTTG TCATCGGCAA CTCGTTTTTC AAGCGCAACT GGGTCGAGGC GCCGGCCTCC
ACCACGGCGC GCGACGGGCT CGGGCCGCAC TTCATCGCCC GCTCCTGCGG CGGCTGCCAT
GTGACCGACG GACGCGGCCA GCCGCCGCAA ATCCGCAACC GGCTGGGGCA AGACCCGGCG
GTCGGGCTGC TGATGCGCCT GTCGGTGCCC GGCAACGCCA ATCCCAAGGC CGGCGTGGTG
CCCGAGCCGG TGTACGGCGA CCAGTTCAAC AACGCGGCGG TGCAAGGCGT CAAGCCCGAG
GGCGAGGTGG TGATTCGCTA CACGCCGGTC AGCGGCCGCT TTGCCGACGG CACGCGCTAC
ACGCTGCAAC AACCGGTTTA CAGCTTCAGC CATCTGGGCT ACGGCCCCAT GCACCCCGGC
GTGATGATCG GGCCGCGCAT CGCGCCGCAG ATCATTGGCG TGGGCCTGCT CGAAGCTATT
CCCGAAACGG AGATTCTCGG CAATGCGGCC CGGCAAGCGG CCACGCCCGG CCCCATCAAG
GGCCAGCCGA ACCGCGTCTG GGATGCGTTT GCCGGGCGCG AAATGCTGGG CCGTTTTGGC
TGGAAGGCCA ACGTCGCCAG CGTGGCGCAC CAGACCGCCG GCGCTTTCCG GGGCGATGTC
GGCATCACCT CATCGAAGGC GCCCGACGAA AGCTGCACGC CCACCCAAAC CGATTGCCTG
AAGTCGCCGC GCGGCGCGCA CGGCGAAGGC CCCGAAATCG ACGACAAGAC GCTGGGCGAT
GTGGTGTTCT ACCAGGCCAC GCTGGCGCCC CCGGCGCGCA GGAACGCACA CGACGCGCAA
ACCGTGCACG GCCAGCGGCT GTTCGCGCAA GCGCAGTGCG CCGCCTGCCA CCGGCCCGAC
TATGTCACCA CGGCGGGGCC TTTTCCGCAG CTGACCAGCA AGGCGCTGAA CGGCCAGCGC
ATCTGGCCCT ACACCGACTT GCTGCTGCAC GACATGGGCG AAGGCCTGGC CGATGGCCGG
CCCGATTTCC AGGCCAGCGG CCGCCAGTGG AAAACGCCGC CCTTGTGGGG CATCGGCCTG
ATCCGCGATG TCAACAGCCA TGACCGGCTG CTGCACGACG GCCGGGCGCG TGGCGCGCTC
GAAGCTATTC TGTGGCACGG CGGCGAGGCC GAGGCCAGCC GGCAGCAGGT GCTGAAGATG
AACAAGGCCG AGCGTGAGGC GCTGGTCAAA TTCGTGGAGT CATTGTGA
 
Protein sequence
MMGIRFAAAL LCASASLGMS LGIGAASPPD DEKPGGDTTV FASGRNAFSF PAANLSDEER 
TRFVIGNSFF KRNWVEAPAS TTARDGLGPH FIARSCGGCH VTDGRGQPPQ IRNRLGQDPA
VGLLMRLSVP GNANPKAGVV PEPVYGDQFN NAAVQGVKPE GEVVIRYTPV SGRFADGTRY
TLQQPVYSFS HLGYGPMHPG VMIGPRIAPQ IIGVGLLEAI PETEILGNAA RQAATPGPIK
GQPNRVWDAF AGREMLGRFG WKANVASVAH QTAGAFRGDV GITSSKAPDE SCTPTQTDCL
KSPRGAHGEG PEIDDKTLGD VVFYQATLAP PARRNAHDAQ TVHGQRLFAQ AQCAACHRPD
YVTTAGPFPQ LTSKALNGQR IWPYTDLLLH DMGEGLADGR PDFQASGRQW KTPPLWGIGL
IRDVNSHDRL LHDGRARGAL EAILWHGGEA EASRQQVLKM NKAEREALVK FVESL