Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_2562 |
Symbol | |
ID | 4687971 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 2700819 |
End bp | 2702246 |
Gene Length | 1428 bp |
Protein Length | 475 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639835570 |
Product | hypothetical protein |
Protein accession | YP_982786 |
Protein GI | 121605457 |
COG category | [C] Energy production and conversion |
COG ID | [COG3488] Predicted thiol oxidoreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.000435033 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATGGGAA TACGTTTTGC CGCCGCGCTG CTCTGCGCAA GCGCCAGTCT TGGAATGAGC CTCGGCATCG GCGCGGCCAG CCCGCCGGAC GATGAAAAAC CCGGCGGCGA CACCACCGTG TTTGCCAGCG GGCGCAATGC CTTTTCGTTC CCGGCGGCCA ACCTGAGCGA CGAGGAGCGC ACGCGCTTTG TCATCGGCAA CTCGTTTTTC AAGCGCAACT GGGTCGAGGC GCCGGCCTCC ACCACGGCGC GCGACGGGCT CGGGCCGCAC TTCATCGCCC GCTCCTGCGG CGGCTGCCAT GTGACCGACG GACGCGGCCA GCCGCCGCAA ATCCGCAACC GGCTGGGGCA AGACCCGGCG GTCGGGCTGC TGATGCGCCT GTCGGTGCCC GGCAACGCCA ATCCCAAGGC CGGCGTGGTG CCCGAGCCGG TGTACGGCGA CCAGTTCAAC AACGCGGCGG TGCAAGGCGT CAAGCCCGAG GGCGAGGTGG TGATTCGCTA CACGCCGGTC AGCGGCCGCT TTGCCGACGG CACGCGCTAC ACGCTGCAAC AACCGGTTTA CAGCTTCAGC CATCTGGGCT ACGGCCCCAT GCACCCCGGC GTGATGATCG GGCCGCGCAT CGCGCCGCAG ATCATTGGCG TGGGCCTGCT CGAAGCTATT CCCGAAACGG AGATTCTCGG CAATGCGGCC CGGCAAGCGG CCACGCCCGG CCCCATCAAG GGCCAGCCGA ACCGCGTCTG GGATGCGTTT GCCGGGCGCG AAATGCTGGG CCGTTTTGGC TGGAAGGCCA ACGTCGCCAG CGTGGCGCAC CAGACCGCCG GCGCTTTCCG GGGCGATGTC GGCATCACCT CATCGAAGGC GCCCGACGAA AGCTGCACGC CCACCCAAAC CGATTGCCTG AAGTCGCCGC GCGGCGCGCA CGGCGAAGGC CCCGAAATCG ACGACAAGAC GCTGGGCGAT GTGGTGTTCT ACCAGGCCAC GCTGGCGCCC CCGGCGCGCA GGAACGCACA CGACGCGCAA ACCGTGCACG GCCAGCGGCT GTTCGCGCAA GCGCAGTGCG CCGCCTGCCA CCGGCCCGAC TATGTCACCA CGGCGGGGCC TTTTCCGCAG CTGACCAGCA AGGCGCTGAA CGGCCAGCGC ATCTGGCCCT ACACCGACTT GCTGCTGCAC GACATGGGCG AAGGCCTGGC CGATGGCCGG CCCGATTTCC AGGCCAGCGG CCGCCAGTGG AAAACGCCGC CCTTGTGGGG CATCGGCCTG ATCCGCGATG TCAACAGCCA TGACCGGCTG CTGCACGACG GCCGGGCGCG TGGCGCGCTC GAAGCTATTC TGTGGCACGG CGGCGAGGCC GAGGCCAGCC GGCAGCAGGT GCTGAAGATG AACAAGGCCG AGCGTGAGGC GCTGGTCAAA TTCGTGGAGT CATTGTGA
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Protein sequence | MMGIRFAAAL LCASASLGMS LGIGAASPPD DEKPGGDTTV FASGRNAFSF PAANLSDEER TRFVIGNSFF KRNWVEAPAS TTARDGLGPH FIARSCGGCH VTDGRGQPPQ IRNRLGQDPA VGLLMRLSVP GNANPKAGVV PEPVYGDQFN NAAVQGVKPE GEVVIRYTPV SGRFADGTRY TLQQPVYSFS HLGYGPMHPG VMIGPRIAPQ IIGVGLLEAI PETEILGNAA RQAATPGPIK GQPNRVWDAF AGREMLGRFG WKANVASVAH QTAGAFRGDV GITSSKAPDE SCTPTQTDCL KSPRGAHGEG PEIDDKTLGD VVFYQATLAP PARRNAHDAQ TVHGQRLFAQ AQCAACHRPD YVTTAGPFPQ LTSKALNGQR IWPYTDLLLH DMGEGLADGR PDFQASGRQW KTPPLWGIGL IRDVNSHDRL LHDGRARGAL EAILWHGGEA EASRQQVLKM NKAEREALVK FVESL
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