| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2560 |
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| Symbol | |
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| ID | 4687698 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 2698160 |
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| End bp | 2699350 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639835568 |
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| Product | FMN-dependent alpha-hydroxy acid dehydrogenase |
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| Protein accession | YP_982784 |
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| Protein GI | 121605455 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1304] L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00607749 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCGCCG CGCCGGGCCG CCCCAAGCAA GCTCGCACCG CAGCCCGTGA GGGCGAAGGT
ATTCCAGTGG TCGCGGCGCC GCTGTCCGTG GAGCAGATTC CAGCCGGCGT CGTCACCCTC
GCCGACCATG AAGCGCATGC ACGGAGCCGG CTTGACGACA ACGCCTGGGC CTACTTCAGC
GGCGGCGCGG GCGATGAGAT CACGCTGCGC GCCAACTGCA GCGCCTGGAG CGAGCGCCTG
CTGCATCCGC GCGTGCTGCA GCCGCTGGCC GGCGGCCACA CGCGCATCGA GTTGCTGGGC
CGGACATTGG CGCACCCTGT TTTTCTGGCG CCCGTGGCCT ATCAGCGCAT GGCGCATGCG
GGCGGCGAAG TGGCCAGCGC CTACGCGGCC TCGGCGCTGG GTGCCGGCAT GGTGCTGAGC
ACCCAGGCCA GCATGCCGCT GGAGACGGTG GCGCAGGCCA TCGCGGGCGA CCCGCAGCGT
GGCCCGCTGT GGTTCCAACT CTACATCCAG CCTGACCGGG GCTTTACCCG CGAACTGGTG
CAGCGCGCCG AGCAGGCCGG CTACGAAGCG CTGGTGCTGA CGGTCGATGC GCCGGCCAGC
GGCGCGCGCG ACCGTGAAAG GCGCGCGAAT TTCCATTTGC CCGCGCATGT GTCTGCAGTC
AACCTGGCCG GTCTGGCGCC CCCGCCGCAA GTGGCCCTGC AGCCGGGCCA GAGCGCGCTG
TTCGATGGTT TGCTGGTCAA CACCCCGACC TGGGACGATG TCGCCTGGCT GCAATCCATC
ACGCGCCTGC CGGTGTTGCT GAAAGGCATT TTGCATCCCG GCGACGCGCG CCAGGCCGCC
GTCTTGCAGG TGGCCGGCAT CATCGCGTCC AACCACGGCG GGCGCACGCT GGACACCGCA
CCGGCCACGG CCAGCGTGCT GCCGCGCATC GTGCAGGCCG TGGCCGGCGA ATTGCCGGTG
CTGGTCGATG GCGGCATCCG TCGCGGCACG GACATCCTGA AGGCCATGGC GCTGGGCGCC
AGTGCCGTGC TGGTCGGGCG GCCCTATATC CATGGCCTGG CCAATGCCGG CGCGCTGGGC
GTGGCGCATG TGCTGCGCCT GCTGCGCGAC GAGCTGGAAA TCGCCATGGC GCTGTGCGGC
TGCCGCACGC TGGCGCAGGC CACGCCCGAG ATCCTGTTCA AGCCGGACTG A
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| Protein sequence | MSAAPGRPKQ ARTAAREGEG IPVVAAPLSV EQIPAGVVTL ADHEAHARSR LDDNAWAYFS
GGAGDEITLR ANCSAWSERL LHPRVLQPLA GGHTRIELLG RTLAHPVFLA PVAYQRMAHA
GGEVASAYAA SALGAGMVLS TQASMPLETV AQAIAGDPQR GPLWFQLYIQ PDRGFTRELV
QRAEQAGYEA LVLTVDAPAS GARDRERRAN FHLPAHVSAV NLAGLAPPPQ VALQPGQSAL
FDGLLVNTPT WDDVAWLQSI TRLPVLLKGI LHPGDARQAA VLQVAGIIAS NHGGRTLDTA
PATASVLPRI VQAVAGELPV LVDGGIRRGT DILKAMALGA SAVLVGRPYI HGLANAGALG
VAHVLRLLRD ELEIAMALCG CRTLAQATPE ILFKPD
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