Gene Pnap_2559 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2559 
Symbol 
ID4687466 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2697480 
End bp2698163 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content64% 
IMG OID639835567 
Productputative hydroxylase 
Protein accessionYP_982783 
Protein GI121605454 
COG category[S] Function unknown 
COG ID[COG3128] Uncharacterized iron-regulated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00546533 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTGCTGA CCCTTCCCAA TCTCCTTTCC CCTGCGGACC TGCTGGCCGC GCGCGCGCTG 
CTGTCGGCGG CGCCCTGGGC CGATGGCCGC GCCACGGCCG GCATCCAGGC CGCGCAGGTC
AAGAACAATG AACAGCTTCC CTCCGATTGC GAGGCGACGC GCGCCATTCA GGCAATGGTG
ATGAAAGGGC TTGATGGCAG CCCGGTCTTT TTTTCCGCCG CGCTGCCGAA AAAGATGTTT
CCGCCGCGCA TCAACCGATA CGGCGGCGAC AGCAATTTTT ACGGCAACCA TGTTGACAAT
GCCATCCGCG CCGTTCCCAA CAGCCCGCAG CGCGTGCGCA CCGACATCTC CTGCACGGTA
TTTTTGAACG ACCCCGGCGA CTATGACGGC GGCGAACTCA CCATTGCCGA CACGTATGGA
GAGCAGCGCG TCAAGCTGCC GGCCGGGCAT GCCGTGCTGT ATCCGGGCAC CAGCCTGCAC
CAGGTCCGGC CGGTGACGCG CGGGCACCGG CTGGCCTGCT TTTTCTGGAT CGAAAGCCTG
GTGCGCGGCG ATGACCAGCG GCGCCTGCTT TATGAACTCG ACATGAACCT GCTGCGCCTG
CGCGAGCGGC ATGGCGAAAC CGCCGAGACG ACGGCATTGA CCGGCACCTA CCACAACCTG
CTGCGCATGT GGGCCGACAC ATGA
 
Protein sequence
MLLTLPNLLS PADLLAARAL LSAAPWADGR ATAGIQAAQV KNNEQLPSDC EATRAIQAMV 
MKGLDGSPVF FSAALPKKMF PPRINRYGGD SNFYGNHVDN AIRAVPNSPQ RVRTDISCTV
FLNDPGDYDG GELTIADTYG EQRVKLPAGH AVLYPGTSLH QVRPVTRGHR LACFFWIESL
VRGDDQRRLL YELDMNLLRL RERHGETAET TALTGTYHNL LRMWADT