Gene Pnap_2545 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2545 
Symbol 
ID4686147 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2682441 
End bp2683166 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content64% 
IMG OID639835553 
Producthypothetical protein 
Protein accessionYP_982769 
Protein GI121605440 
COG category[S] Function unknown 
COG ID[COG3471] Predicted periplasmic/secreted protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.470705 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTACTC CTAAATTGAT AGCTGCTTGC GCCCTTGCAG CATGCGCAAC AGGTCTTTTT 
GCCCAGAATT TGCCGAACGA GCCGCTGAAA AACGTGGCCC AGATTTCCGC CAGCGGTTCG
GTCGAGGTGC AGCAGGATCT GCTGTCGATC TCGATGAGCA CCAGCCGCGA CGGCCTTGAC
GCCGGCACGG TGCAGACCCA GCTCAAGCAG GCGCTTGACG CGGCCCTGAC CCAGGCCAGG
CAAGCCGCAT CGCCGGGGCT GATGGAGGTG CGCACCGGCA ATTTCAGCCT GTACCCGCGC
TATGGCAAGG ACGGGAAGAT CAACGGCTGG CAGGGCTCGA CCGAGCTGGT GCTGGAAGGC
AAGGACTTTG CGCGCATCAC CGGAACGGCC GGCAAGATCC AGAGCTTGAG CCTGGGCAGC
GTGAGCTTTG CGCTGAGCCG CGAGCAGCGC GCCAAGGTCG AGGGCGAGGC CCAGGCGCAG
GCGATTGAGC GTTTCAAGGC CAAGGCGGGC GAGGTTTCCA GCGCATTCGG CTTTGGCGGC
TATACCCTGC GTGAGGTATC GGTCAACGCC AATGACCAGG GCTTCACGCC GCGCCCGCGC
ATGGTGGCGA TGAGCGCCAA GTCGGACATG GCCGAGTCTG CTGTTCCGGT GGAGGCCGGC
AAAAGCACGG TGCTGGTGAA TGTTTCGGGT TCGGTGCAGA TGCTGCCGCT GCCCGCCCGT
CCATGA
 
Protein sequence
MLTPKLIAAC ALAACATGLF AQNLPNEPLK NVAQISASGS VEVQQDLLSI SMSTSRDGLD 
AGTVQTQLKQ ALDAALTQAR QAASPGLMEV RTGNFSLYPR YGKDGKINGW QGSTELVLEG
KDFARITGTA GKIQSLSLGS VSFALSREQR AKVEGEAQAQ AIERFKAKAG EVSSAFGFGG
YTLREVSVNA NDQGFTPRPR MVAMSAKSDM AESAVPVEAG KSTVLVNVSG SVQMLPLPAR
P