Gene Pnap_2540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2540 
Symbol 
ID4686350 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2678219 
End bp2679064 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content64% 
IMG OID639835548 
ProductN-formylglutamate amidohydrolase 
Protein accessionYP_982764 
Protein GI121605435 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3741] N-formylglutamate amidohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.658679 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCTCA TCACCCACCT TCCCGGCAGC AGCGCGCTGG TTCTTGACTC GCCCCACAGC 
GGCGTGGTTT ATCCAGCGGA TTTTCTCTAC ACCTGCGAGC TGGCCGTCTT GCGGCGCGCT
GAAGACACGC ATGTTGAAAA GCTGTATGAC TTTGCGCCCG GCCTGGGCGC GCACTGGATT
GAAGCGCATT TTCCGCGCAG CTACCTCGAT GCCAACCGCA ACACCACCGA GCTGGATGTC
TCGCTGCTGG ACGAGCCCTG GCCGCATCCG GTGGAAACCG ATCCCGGCCT GCTGTCCAAG
GTGCGGCTCG GCAAGGGGCT GGTCTGGCGC ACCACGGACG ACGGCCTGCC CATCTATGAG
CGCAGGCTGT CGGTCGAAGA AGTGAGCGCG CGCATCGCGC ACTGCTGGCA GCCCTACCAC
GCGGCCGTGG CGCAGGCGAT TGACCAGGCG CATGCCCTGC ACGGCTACAG CATCCATGTC
AATTGCCATT CGATGCCGGC GGTTGCGTCC AGCCACGCGA CCGACTTTCC GGGCGAAAAG
CATGCCGATT TCGTGATCGG CGACCGCGAT GGCAGCACGG CCAGCCCGGC CTTGTCCGCG
CTGGTCTGCG CGCATTTGCG GGCGCTGGGC TACCACGTGG CGTACAACCA TCCGTACAAG
GGCGTGGAAC TGGTGCGGCG CTACGGCGAC CCGGCAGCGC AGCGGCACAG CCTTCAGCTT
GAAATCAACC GCAAGCTCTA CATGAACGAA GAAACACTGG AGATGACGCC AGGCGCAGAT
GCCCTGAAGG CGCATCTGCG CTCGCTGGTC GAACTGCTGC TGCACACCGA TCCACGGCGG
CTGTAA
 
Protein sequence
MQLITHLPGS SALVLDSPHS GVVYPADFLY TCELAVLRRA EDTHVEKLYD FAPGLGAHWI 
EAHFPRSYLD ANRNTTELDV SLLDEPWPHP VETDPGLLSK VRLGKGLVWR TTDDGLPIYE
RRLSVEEVSA RIAHCWQPYH AAVAQAIDQA HALHGYSIHV NCHSMPAVAS SHATDFPGEK
HADFVIGDRD GSTASPALSA LVCAHLRALG YHVAYNHPYK GVELVRRYGD PAAQRHSLQL
EINRKLYMNE ETLEMTPGAD ALKAHLRSLV ELLLHTDPRR L