Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_2539 |
Symbol | |
ID | 4686072 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 2677400 |
End bp | 2678182 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639835547 |
Product | 3-hydroxybutyrate dehydrogenase |
Protein accession | YP_982763 |
Protein GI | 121605434 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | [TIGR01963] 3-hydroxybutyrate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.643723 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCAAAG GTAAAACAGC TCTTGTCACA GGCTCGACCA GCGGAATCGG CCTGGGCATT GCCAAGGCCC TGGCCGAACA GGGCGCCAAC ATCGTCTTGA ACGGATTTGG CGATGTGGAC GGCCCCAAGG CCGAGATTAC AGCGCTGGGC GTGAAAGTCG CTTACCACGG CGCCGACATG AGCAAGCCAG GTGAGATCGA GGAGATGATG CGTTTTGCCG CCGCCGAGTT TGGCCAGGTC GATATCCTGG TCAACAACGC CGGCATCCAG CACGTTGCCC GGATTGAAAA CTTTCCGGCT GAAAAGTGGG ATGCGATCAT CGCCATCAAT CTGAGCAGCG CCTTTCACGC AACCCGCCTG GCGCTGCCCG CCATGCAGGC CGCTGACAAC GGCAAGGGCT GGGGCCGCAT CATCAACCTG GCGTCGGTGC ATGGCCTGGT GGGTTCGGCC GAAAAATCAG CCTATGTCGC GGCCAAGCAC GGCATTGTCG GCCTGACCAA GGTGACGGCC CTTGAAAACG CCACCAGCGG CGTGACGTGC AACGCCATCT GCCCGGGCTG GGTGCTGACG CCGCTGGTGC AAAAACAGGT CGATGCCCGG GCTGCGGAAG GCGGCATCAG CAACGAAGCG GCCAAGCAGC AACTGCTGGG TGAAAAAGAA CCGTCGATGC AGTTCACCAC GCCTGAAGAA CTGGGCGCGC TGGCGGTGTT TTTCTGCTCG CCGGCCGGCG CCAATATCCG GGGCGTGGCG TGGAACATGG ATGGCGGCTG GACCGCGCAA TAA
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Protein sequence | MLKGKTALVT GSTSGIGLGI AKALAEQGAN IVLNGFGDVD GPKAEITALG VKVAYHGADM SKPGEIEEMM RFAAAEFGQV DILVNNAGIQ HVARIENFPA EKWDAIIAIN LSSAFHATRL ALPAMQAADN GKGWGRIINL ASVHGLVGSA EKSAYVAAKH GIVGLTKVTA LENATSGVTC NAICPGWVLT PLVQKQVDAR AAEGGISNEA AKQQLLGEKE PSMQFTTPEE LGALAVFFCS PAGANIRGVA WNMDGGWTAQ
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