Gene Pnap_2529 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2529 
Symbol 
ID4686137 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2664051 
End bp2665205 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content55% 
IMG OID639835536 
Producthypothetical protein 
Protein accessionYP_982753 
Protein GI121605424 
COG category[L] Replication, recombination and repair 
COG ID[COG4227] Antirestriction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0713703 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGAGG CCAAAAAAGA CCTGCGTGAG CAAATCACGG ACCGCATCGT CGCCTCCCTG 
GAGTCAGGCG TGATGCCCTG GCGCAAAGGA TGGACCAATG AAGGCGGTGT CGCTGCTGGA
CTGCCCCGCA ATGCGGTGTC CGGCCGCATT TATAGCGGCG GCAACCGGCT CATGCTGATG
ATGCAGGGAA TGGACAAGGG CTACGCTGAT CCACGCTGGC TGACTTACAA GCAGGCCGCC
AGCCTGGGCG GTGGTATCAC CCAAGGCGAA AAGTCAACGC CCATTGAATA CTGGGACGAA
CTGCCTTTTC ATCGCCGCCG GGATGTGGAC ATCACCCACA ACGGCGCTCG GGTCACGCTC
GCAGAAGCGC CAGAAAAATA CGCACAAACG GTCAAACTCT CCAACGGCTC GCAAGTGGAC
ACCCGCCAAT TGGTGGTGGA GTCGGGTGGA ACCAAATACA GCTGGCGGCA AGCTGAGCGG
AGCCTGAACC TGCTGTTCGA AAAAACCAGT CATGCGTTCA ACGTCGAGCA ATGCAATGGC
TTGTCACTGG AACCCATCAC CACCGCAAAA GACCGCCCTG CTGTCGAAAA AATCGCTGCG
GTTGAAAAAG TGGCCAGCGG TATGAAGCTT GACGGACTGA CGCTGGGTCA CGGCGGTGAT
CGGGCTTTTT ACTCGCCAGC ACGCGATGCC GTTCAAATGC CAAATCGTGA CCAATTTGAA
AGCCCTGAGG CCTATGCAGG CACCTTGCTG CATGAACTTG GCCACGCCAC CGGTGGAGAA
AACAGGCTGA ACCGCCCTCT CTCCAACGGC TTTGGCACGA GCGAGTATGC CCGTGAAGAA
TTGGTGGCTG AGTTATGCAG CGCTTTCGCC AGTGCCGAGA CGGGTGTGCA GTTTGACGAC
AAAAATCACG CAGCATATAT CGGCTCATGG CTTGAGACCC TCAAAGCTGA CAAACATTCC
GTTTTTGCAG CGGCGAAAGA CGCCTCAAAG GCCGTGGACT ATTTGCTTGA AAAAAGCCTA
GTTGTGGAAG TTGACAAGGA CGTTGGCCTG GTGGCGGATG AAGTGCAAGT CGATCCGGTG
AAAGAGGAAG TAGCGAAAGC ACCAAAGTCC AGGGCCAAAA AAATAACAAA ACCTGAAACT
GAGCTGGAAA TTTAG
 
Protein sequence
MTEAKKDLRE QITDRIVASL ESGVMPWRKG WTNEGGVAAG LPRNAVSGRI YSGGNRLMLM 
MQGMDKGYAD PRWLTYKQAA SLGGGITQGE KSTPIEYWDE LPFHRRRDVD ITHNGARVTL
AEAPEKYAQT VKLSNGSQVD TRQLVVESGG TKYSWRQAER SLNLLFEKTS HAFNVEQCNG
LSLEPITTAK DRPAVEKIAA VEKVASGMKL DGLTLGHGGD RAFYSPARDA VQMPNRDQFE
SPEAYAGTLL HELGHATGGE NRLNRPLSNG FGTSEYAREE LVAELCSAFA SAETGVQFDD
KNHAAYIGSW LETLKADKHS VFAAAKDASK AVDYLLEKSL VVEVDKDVGL VADEVQVDPV
KEEVAKAPKS RAKKITKPET ELEI