Gene Pnap_2525 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2525 
Symbol 
ID4686349 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2660462 
End bp2661322 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content59% 
IMG OID639835532 
Producthypothetical protein 
Protein accessionYP_982749 
Protein GI121605420 
COG category 
COG ID 
TIGRFAM ID[TIGR03340] phosphonate utilization associated putative membrane protein 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.482024 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGATCA GCGGCGCTGC GCTTGCCGTG GCAGCATCAG TCGTCATGCA TGTCGCCTGG 
AATTTGATTG CCCGGCACCA GTCGCGGGAT GCCTATCCGC TTTGGTGGGT TCTGCTGGCC
CATCTGGTGT TGTTGGGGCC GTGGGGTGCT TATTCACTTT TCACCGAAGT GCAGTGGACG
CCCACTCTGG GCAAATGGGT ACTGATTTCT GCGACTGCCA ATGTGGTGTA TTTCGTGGGT
TTGCGTCGCG CCTACGAGCA TGCGCCCGTG GCCTTCGTTT ACCCACTTGT GCGCAGCTCC
CCGATCCTTA TTGCGTTGTG GAGCACGCTG TTCCTGGGCG AAACGTTAGG CGTTTTTGCC
TGGACAGGAC TCCTCGTGAG CGTCCTTGGA CTGGTCGTGC TGGCGCGCGT CGGTGGCAAT
GCACACGACA TCAGGGCCCT GCCATGGGCC TTGCTGGCGA TGTTCGCAAC CAGCATTTAC
TCTCTGACGG ATAGGGCGGC CACCGCCCAC ATCCCGGGCT TTGGCGGGCT GGTCGGATTC
ATCACGATCG GCTACTTTGC ATCGTGGCTG GCGCTGACGA TCGATCTTCG TCGCACCACA
GGGTCATGGC GACCCAAAGC CCGGATTGGC CTGCCCGTAG CCGTCGTCGG TGGACTGTGC
GTTGGCTTAG CCTATGCGCT GGTTATTCAC GCCATGCGTT CGATGCCTGC CGCCATCGTT
GTCGCGTTTA CAAACGCCGG GATTGTTCTA GCGAGCGGTG CCTCCATCTT TGTTTTCAAG
GAAAGGGCGG CTTGGAAAGC AAGGGCATCC GCCGCCTTCA TCGTTTGCGC AGGTTTGCTG
ATGCTTTCAT TCAGAAACTG A
 
Protein sequence
MMISGAALAV AASVVMHVAW NLIARHQSRD AYPLWWVLLA HLVLLGPWGA YSLFTEVQWT 
PTLGKWVLIS ATANVVYFVG LRRAYEHAPV AFVYPLVRSS PILIALWSTL FLGETLGVFA
WTGLLVSVLG LVVLARVGGN AHDIRALPWA LLAMFATSIY SLTDRAATAH IPGFGGLVGF
ITIGYFASWL ALTIDLRRTT GSWRPKARIG LPVAVVGGLC VGLAYALVIH AMRSMPAAIV
VAFTNAGIVL ASGASIFVFK ERAAWKARAS AAFIVCAGLL MLSFRN