Gene Pnap_2518 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2518 
Symbol 
ID4690032 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2652625 
End bp2653311 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content60% 
IMG OID639835526 
Producthypothetical protein 
Protein accessionYP_982743 
Protein GI121605414 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.239256 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAAGACG AAACAGGCAA CACTTTGAGC GTTGCCAACG ATACAACGAC ACTCGAAGCT 
GACGTGTGCA GCGCCGTCGA GCAGGGTCAC GATGTGCAGA AAATTGTGCG ACTGCTCACC
TTGCGCAAGA TCAATGCGCG CTCGCTCGAT ATCGAATCCC TGCGGCAGAT CACGCGTGCT
GTACTGAGCG GCGCGCGAGC AGGGGCGCAA AGGGGGTTGC AGCACTCAGC GGCACAAACC
AACATCACAC GAGTACACCT CCAACGGGCT GTCGCCGGGC TGGATGCGGC GTTGGCGCAG
TTGGCCGAGG CCTCCAAACT GGCGCTGGAA GAAGCGGCGG CCCGGGCGCA GGCATTTTCC
AGAGAAGACC TCACCCGCGC GCGATCCGAC CTGGAGAGCC TGGAAGCGAT GTTTCTCGAA
ACCATGCAAG CATCGGCCTC AGGGGTCAAG GATGTAGCGC AAGAAATTCT CTATGACCTG
GTTACGCATA CCCGCATTCA TGGTTCTGCG GTGGGCAGAC AGTTGAGAGA AACCTTGCCC
ATCATTACGC AACAGCTTGA CGCCGCAGGA CGCACTCAGG CCGTGACTGG GCTGCATCTG
GCACAGGCCA CTTCCGACCT GTTGCGTCAA ATCGCTCCAG GCGTGCTCAT CGGCTTGGCC
GTTCACGTCA ACCCCCTCCA ACCTTAA
 
Protein sequence
MQDETGNTLS VANDTTTLEA DVCSAVEQGH DVQKIVRLLT LRKINARSLD IESLRQITRA 
VLSGARAGAQ RGLQHSAAQT NITRVHLQRA VAGLDAALAQ LAEASKLALE EAAARAQAFS
REDLTRARSD LESLEAMFLE TMQASASGVK DVAQEILYDL VTHTRIHGSA VGRQLRETLP
IITQQLDAAG RTQAVTGLHL AQATSDLLRQ IAPGVLIGLA VHVNPLQP