| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2510 |
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| Symbol | |
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| ID | 4686099 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 2646379 |
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| End bp | 2647161 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639835518 |
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| Product | conjugal transfer protein TrbG/VirB9/CagX |
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| Protein accession | YP_982735 |
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| Protein GI | 121605406 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3504] Type IV secretory pathway, VirB9 components |
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| TIGRFAM ID | [TIGR02775] P-type conjugative transfer protein TrbG |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.108506 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.474909 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCTGATG CGCTCGTCGG TGCCGGTGGC GTTGTCGAAT ATCCCTATGG ATATTCACGT
CCCACGATTA CTTGCGCCCC CTTACACGTC TGCTCTGTAG CACTGCAAGA TGGCGAGGCC
GCGACCAGTG TGTCAATTGG CGATACGGTG CGATGGTTAT TACAGACCGC AACAGCCGGG
GCAAAGCCGG TGATGATGAT CAAACCGACA CAGGCGGGCC TCTCAACGAA CCTGGTTGTA
ACGACCGACA AGGGCCGCAT TTATTACATG CACCTGGTGT CGAGCAAAAC CGAGTATGTG
CCTATGGTGA GTTGGTATGA CCCGGCTGCC ATGACGCGCG ACTTGAGCGC CGAGGCGCAA
ACATCGGCAC GGCAAAAGGC AGAATTTGAG GCAACGATGG TTGCCACCAA GATTGCCGCC
GAACAGGCCA AAGCCCAAAG GGTCGTGGCG GACAAGTCGG TTGGCAAGCT TGATCCAACG
ACGCTTGATT TTGGCTACAC CTGCACCGGT GAGGCGGCAT TCAAACCTGC ACGTGTCTTT
GCCAATGACA CGCACACATT TATTCAATTG CCACCTGGTG CTTCGGCCAG TGATGCGCCG
GCGGTGTTCA ATGTCTCGAA CAATGAAACC GAGCTGCTGA ATTCCAGGCT CGTAAATGGC
TACTACATCA TCGATGGCAA ACCTGCCAAA CTCAGTCTGG TTCTGGGTGT GGGTGCCAGC
GCCCAAACCG TCAAATGCCA AAAATCAGTG CCAAACAGTT TGTTTAGCTG GGGCACCAAA
TGA
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| Protein sequence | MADALVGAGG VVEYPYGYSR PTITCAPLHV CSVALQDGEA ATSVSIGDTV RWLLQTATAG
AKPVMMIKPT QAGLSTNLVV TTDKGRIYYM HLVSSKTEYV PMVSWYDPAA MTRDLSAEAQ
TSARQKAEFE ATMVATKIAA EQAKAQRVVA DKSVGKLDPT TLDFGYTCTG EAAFKPARVF
ANDTHTFIQL PPGASASDAP AVFNVSNNET ELLNSRLVNG YYIIDGKPAK LSLVLGVGAS
AQTVKCQKSV PNSLFSWGTK
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