Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_2497 |
Symbol | |
ID | 4688883 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 2632633 |
End bp | 2633598 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639835505 |
Product | type II secretion system protein E |
Protein accession | YP_982722 |
Protein GI | 121605393 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
TIGRFAM ID | [TIGR02782] P-type conjugative transfer ATPase TrbB |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACAC ACCAGAACAC GTCCAGCCAT GAGTTCCACC GCAGGTCGGA CGATGCACTG CGGCGCGCCC TCGGCGCTGA CATCCTGGCC GCCCTGGCTG ATGACCGGGT GGTAGAGATC ATGCTAAACC CGTCGGGCGA CCTCTGGACT GACTCCCATG TAGGCGGGAT GCAATGCATT GGCAAGATTG ACCGTGTACG AGCCATGGCG ATTGTTGCCA CGGTGGCGGC CATGCTGGGT ACCACGGTCA CACCTGACAA CCCGATTTTG GAATGCGAGT TGCCCTTGGA TGGTTCGCGG TTTGAAGCCT TGATTCCACC GGTTGTGCCA GCGCCAACTT TTGCCCTTAG AAAAAAGGCA ACATTGATTT TTAGCCTGGC TGACTATGTT CGGACCGGGG TGATGACTGA GCTGCAAGCC ACATTGATCA AAACGGCGGT TGCAGACAGA AAAAATATCC TGATTGCCGG GGGCACTGGC TCTGGCAAAA CGACTTTAGC CAATGCCGTC TTGAATGAGA TTTCTTTCAT ATCACCTGAT CACAGAATCG TCATTATTGA AGACGTGTTG GAGCTGCAAT GCAGCGTGAA AAACACGGTA TTTTTAAGAA CATCAGCCAA TATTGACCAA GTTGGTTTAT TGCGAGCAAC GCTTCGATTA AGACCTGACC GAATTGTTGT GGGTGAGGTC CGGGACAAGT CGGCTCTGGC GTTGCTGAAG GCATGGAATA CGGGGCATCC CGGCGGCATT GGCACCGTCC ATGCAAATTC TACTGGTACA GCCTTGGTCC GAATCGGACA GTTAATTCAA GAAGCGGGTG TGCCTGCGGC ACCTGAGTTA ATCAGCGAAG CGGTCAATAT GGTGATATCC ATCCGCAGGA ATTCCACCGG CCGAATTATT GATGAAGTAG CTGAAGTAAC CAATTGGTCG AGTGCGATTG GTTTTGAGCT GAGACGACTT GGCTAA
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Protein sequence | MSTHQNTSSH EFHRRSDDAL RRALGADILA ALADDRVVEI MLNPSGDLWT DSHVGGMQCI GKIDRVRAMA IVATVAAMLG TTVTPDNPIL ECELPLDGSR FEALIPPVVP APTFALRKKA TLIFSLADYV RTGVMTELQA TLIKTAVADR KNILIAGGTG SGKTTLANAV LNEISFISPD HRIVIIEDVL ELQCSVKNTV FLRTSANIDQ VGLLRATLRL RPDRIVVGEV RDKSALALLK AWNTGHPGGI GTVHANSTGT ALVRIGQLIQ EAGVPAAPEL ISEAVNMVIS IRRNSTGRII DEVAEVTNWS SAIGFELRRL G
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