| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2488 |
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| Symbol | |
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| ID | 4689077 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 2625012 |
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| End bp | 2626274 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639835496 |
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| Product | Rieske (2Fe-2S) domain-containing protein |
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| Protein accession | YP_982713 |
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| Protein GI | 121605384 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.423018 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGTGAAC AAAAAACAGT ATTCCCGGAA AACCCGACGT GGCCGGGGGA AGGAACCAGC
AGGGTACCCT TCTGGGCCTA TACCCGAGAG GATTTGTACA AGAAGGAACT GGACCGACTA
TTCTATAACG GCCACTGGTG TTACGTCGGC CTGGACGCTG AAATCCCGAA TCCGGGGGAC
TTCAAGCGAA CTGTGATTGG TGAACGCTCC GTCATCATGG TGCGTGATCC GGAAGGTGGC
GTCAATGTGA TCGAAAACGT TTGCGCTCAC CGTGGCATGC GTTTTTGCCG TGAACGCAAC
GGTCATGCCA AAGACTTTTT CTGCCCCTAC CATCAATGGA ACTACAGCCT CAAGGGTGAC
CTTCAAGGTG TGCCGTTTCT TCGCGGCGTC AAGCAAGAGG GAAAAGTCAA TGGCGGCATG
CCCAAAGACT TCAAGGTGTC AGACCATGGT CTGACCAAGC TCAAGGTAGC CGTGCGGGGT
GGCGTGGTGT TCGCCTCCTT TGATCATGAC GTCGAACCTT TCGAGGAATT CCTGGGCCCG
ACCATTCTGA AATACTTTGA CCGCGTCTTC GACGGCCGCA AGCTGGAGAT ACTGGGCTAC
CGGCGCCAGC GCATTCCGGG CAACTGGAAG CTGATGCAGG AAAACATCAA GGATCCGTAT
CACCCCGGCC TGCTGCACAC TTGGTTCTCC ACCTTTGGAT TGTGGCGCGC GGATAACAAG
TCCGAATTGA AGATGGACGA CAAGTTTCGC CATGCCGCCA TGATCTCCAC ACGCGGCCAA
GGCGGCAAGA ACGCCGATGT GGTGTCAGGG GTGGACAGTT TCAAAGACCA GATGAAGGTC
AATGATCCGC GTCTGCTGGA CATCGTTCCG GAACCGTGGT GGGGTGGTCC CACAGCTGTC
ATGACCACGA TTTTTCCGAG CGTGATCATT CAGCAGCAGG TCAACAGCGT GTCCACCCGC
CACATCCAGC CCAACGGTCA TGGCTCCTTT GATTTTGTCT GGACACACTT CGGCTTTGCG
AACGACACAC CGGAGATGAA AGAACGCCGC CTGATACAGG CTAATTTGTT CGGCCCGGCC
GGTTTCGTTT CTGCCGACGA TGGCGAGGTC ATTGAATGGT CACAGCAGGG CTTTGAGCAA
AAGCCATCGC ACCGCACGGT CGTGGAAATG GGCGGGTACG ACATTGGTGA CACCGATCAC
ATGGTCACCG AGACCCTGAT CCGTGGCATG TACAACTACT GGCGCAAGGT GATGGGGGAA
TAA
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| Protein sequence | MREQKTVFPE NPTWPGEGTS RVPFWAYTRE DLYKKELDRL FYNGHWCYVG LDAEIPNPGD
FKRTVIGERS VIMVRDPEGG VNVIENVCAH RGMRFCRERN GHAKDFFCPY HQWNYSLKGD
LQGVPFLRGV KQEGKVNGGM PKDFKVSDHG LTKLKVAVRG GVVFASFDHD VEPFEEFLGP
TILKYFDRVF DGRKLEILGY RRQRIPGNWK LMQENIKDPY HPGLLHTWFS TFGLWRADNK
SELKMDDKFR HAAMISTRGQ GGKNADVVSG VDSFKDQMKV NDPRLLDIVP EPWWGGPTAV
MTTIFPSVII QQQVNSVSTR HIQPNGHGSF DFVWTHFGFA NDTPEMKERR LIQANLFGPA
GFVSADDGEV IEWSQQGFEQ KPSHRTVVEM GGYDIGDTDH MVTETLIRGM YNYWRKVMGE
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