Gene Pnap_2478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2478 
Symbol 
ID4689576 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2616304 
End bp2616897 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content53% 
IMG OID639835486 
ProductDSBA oxidoreductase 
Protein accessionYP_982703 
Protein GI121605374 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3917] 2-hydroxychromene-2-carboxylate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGTTG ATTTTTATTT CGATTTTTTG AGCCCCTTTT CGTACCTGGC AAACCACCGT 
TTGTCGGTGC TAGCGGGGCG TTATGGATTC CCCATCCAGT ATCACGCCAT TGATTTGGCG
CGAGCAAAGA CGGCCATTGG CAACATCGGG CCGTCCAATC GGGATCTGAA GACAAAACTT
GACTATTTGA AGGTGGATTT GCAGCGATGG GCCGATCTCT ACGAGATTCC GCTGGTCTTT
CCCCCCAACT TCAACAGCAG CCGGATGAAC GCCGGGCTGT ATTACCCGGC TGCCAGGGAA
CGAGCCGCTG AATATGTTCG CTTCGTTTTC GATTCGGCTT GGGGAAAAGG GTGGGCATTG
GATGCAGATA GCTTGCTGGC TCAGGTATGC GACAAGCTGA ACTGGGATCG CGGTGACTTT
GAAACGTTTT TGTGCAGCGA AAATGCCGCC AAGGCATACG ACGAGGAGAC GCAGGCGGCC
ATTGACCGAA AAGTCTTCGG GGTTCCGACC GTATTTTGGG ATGATCAAAT GTGGTGGGGG
AATGACCGTC TTTTCATGCT TGAGAGCGGG TTGCAAAAGG AGAGGCAGCC ATGA
 
Protein sequence
MMVDFYFDFL SPFSYLANHR LSVLAGRYGF PIQYHAIDLA RAKTAIGNIG PSNRDLKTKL 
DYLKVDLQRW ADLYEIPLVF PPNFNSSRMN AGLYYPAARE RAAEYVRFVF DSAWGKGWAL
DADSLLAQVC DKLNWDRGDF ETFLCSENAA KAYDEETQAA IDRKVFGVPT VFWDDQMWWG
NDRLFMLESG LQKERQP