| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2468 |
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| Symbol | |
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| ID | 4690034 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 2608360 |
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| End bp | 2609904 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639835477 |
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| Product | integrase catalytic subunit |
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| Protein accession | YP_982694 |
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| Protein GI | 121605365 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4584] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCGTTA CCTCTGAACT TCGCGCACAG ATTCTGCGCC TGTACCTTGC TGAGCACTGG
CGTGTCGGCA CAATCGCGCG TCAATTGCGG CTTCACCGTG ACACAGTTCG GCGGGTATTG
GCCATCTCCA GCGTGTTGCG TGCGCTACCG TCAGCACCGC CACGATTGAT TGACCCGTTC
GTGCCCTTCA TCAAGGAAAC TCTGGCCAAG TTCCCGACCT TGGCGGCCAG TCGCCTGTAC
GCCATGGTCC AAGAGCGTGG CTATGGCGGC GGTAGCTCGC ATTTCCGCCA TCTGGTGGCA
CCCCTGCGCG CCCGGCCGGC GGCCGAGGCC TACTTGCGAC TTCGAACACT TCCCGCTGAA
CAAGCCCAGG TGGATTGGGC TCATATGGGC CATGTGGTGG TCGGCCGGGC CAAGCGTCCC
CTGATGGCAT TCGTGATGGT GCTGTCGTAT TCCAGGCGCA TCTTTTTGCA CTTCAGCCTG
AATGCCCAGA TGGACAACTT CCTGCGTGGT CACGTTCTTG CGTTCGAGGC ATGGGGTGGA
GTTCCCCGCG TCATTCTCTC GGACAACCTC AAGAGCGCCG TGCTGGAACG ACTGGGCAAC
GCCATTCGGT TCAACCCGGA TTACCTGGCC TTTGCCGCCC ATTACCGCTT CGAGCCACGC
CCGGTGGCTG TGGCGCGCGG CAATGAGAAG GGCCGGGTTG AACGCTCTAT CCGCTACATC
CGCGACAACT TCTTTGCCGC CCGTGTCTAT ACGGATGTGG CCGACCTCAA TGCCCAAGCC
AAAGCCTGGA CGGATGGGCC CGCATTTAGC AGGCCTTGGC CTGAAGGTGA GCAGCTAACC
GTGCGTCAGG CCTTTGAGAC AGAGTCGCCC AGCCTGATGG CCCTGCCAAT GGATGCCTAC
CCGGTGGATG CGCGTGTTGA GGTGAAGGTC GCAAAGACAC CCTACGTCCG GTTTGACCTC
AATGACTATT CCATCCCGCA CACCCATGTC CGACGCACTG TGACGGTGCT GGCCAATGCA
GAACGGGTGC GCGTGCTCGA TGGCGTCACC GTCCTGGCCG AGCATGTGCG CAGCTATGAC
AAGGGTGAGC AGGTTGAGAT TACGGCCCAT GTGGACGAGC TAATCGAGCG CAAACGCGGT
GCCCGCCAGC ACAGGGGAGT CAGCCAACTG ACCCAGGCCA TACCGGCCAT GGCGGACTTC
CTGGCCCGTG CTGCGACCAA AGGCCACCAC CTGGCTTCCA TGACGCGGGT GTTGGGCCAG
ATGCTGGACC ATTACGGGGC GCAGGCCATG CAAGAGGCCG TGCTCGAAGC CCTGCGCCGG
GATGTTCCGC ATCACAACGC GGTGCGTCTG GCCCTTGAGC GTGCGCGCCA AGAACGCCGG
GACAGTCCGC TGGTGGTGCC CCAGCTCTCC GAGCGTGCGA AACGCATGGA CGTGACGGTC
AAGCCGCACC GGCTGGACGC CTATGACGAA TTGCAGGCAC ATGCCCAGCA GACCGACCAA
TCCAGCGATG GCCATTCCAC AGAAACCGAC GAGGACACCC AATGA
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| Protein sequence | MVVTSELRAQ ILRLYLAEHW RVGTIARQLR LHRDTVRRVL AISSVLRALP SAPPRLIDPF
VPFIKETLAK FPTLAASRLY AMVQERGYGG GSSHFRHLVA PLRARPAAEA YLRLRTLPAE
QAQVDWAHMG HVVVGRAKRP LMAFVMVLSY SRRIFLHFSL NAQMDNFLRG HVLAFEAWGG
VPRVILSDNL KSAVLERLGN AIRFNPDYLA FAAHYRFEPR PVAVARGNEK GRVERSIRYI
RDNFFAARVY TDVADLNAQA KAWTDGPAFS RPWPEGEQLT VRQAFETESP SLMALPMDAY
PVDARVEVKV AKTPYVRFDL NDYSIPHTHV RRTVTVLANA ERVRVLDGVT VLAEHVRSYD
KGEQVEITAH VDELIERKRG ARQHRGVSQL TQAIPAMADF LARAATKGHH LASMTRVLGQ
MLDHYGAQAM QEAVLEALRR DVPHHNAVRL ALERARQERR DSPLVVPQLS ERAKRMDVTV
KPHRLDAYDE LQAHAQQTDQ SSDGHSTETD EDTQ
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