Gene Pnap_2461 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2461 
Symbol 
ID4689689 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2603082 
End bp2603396 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content56% 
IMG OID639835471 
ProductRieske (2Fe-2S) domain-containing protein 
Protein accessionYP_982688 
Protein GI121605359 
COG category[P] Inorganic ion transport and metabolism
[R] General function prediction only 
COG ID[COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.601158 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAAA ACTGGATGGA TGCAGCAGCG CTTTCGGATG TTCCCGAGGG TGATGTTATG 
GCAGTGCAGG TAGCGGGCAA GGAGATTGCG TTGTACGAGG TTGACGGCGA GGTCTTCGCA
ACGGACAACA TCTGCACCCA CGGCCATGCG CGCTTGAGCG ACGGCTTTCT TGAAGGCCGT
GAAATCGAGT GCCCCTTGCA TCAGGGGAGA TTTGATGTTT GCTCCGGCCT GGCGATGTGC
GCCCCCTTGA CCGAGAACAT CAAGACTTAC GCAGTCCGTA TTGAAAACAT GCGCGTGATG
CTGAAACTCG ACTGA
 
Protein sequence
MAENWMDAAA LSDVPEGDVM AVQVAGKEIA LYEVDGEVFA TDNICTHGHA RLSDGFLEGR 
EIECPLHQGR FDVCSGLAMC APLTENIKTY AVRIENMRVM LKLD