Gene Pnap_2453 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2453 
Symbol 
ID4689861 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2596034 
End bp2596735 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content59% 
IMG OID639835463 
Productfumarylacetoacetate (FAA) hydrolase 
Protein accessionYP_982680 
Protein GI121605351 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCAAT ACCTGTTTAA CCCTCCACCC GCAATGTCCG TTCCAGTCCG TGGCCTGGAC 
GCTCGTTTTC CCATCAACCG CCTGTTCTTT GTCGGCCGCA ATTACCACGC CCACGCGGTG
GAAATGGGGC GTCCGGTGGA CAAATCCGTG GAGCGCCCCT TTTACTTCAC CAAAGCGCCA
CAGACCCTGA CGGATTCGGG CGCAACCGTG GCCTACCCAC CCGAGACTAG CAACTACCAC
TTCGAGATGG AATTGGTTCT GGCCATTGGT AAGGCGGGCT TTCGCGTGAG GGCGGAAGAT
GCCCATACGT TGATCTACGG CTACGCAGCC GGCCTGGACA TGACACGCCG AGACTTGCAA
CTGGTGGCGC GCGACAAGGG TCGCCCCTGG GACTTGGGCA AGGATGTGGA GCAGTCGTCC
GTCTGCTCGG AAATCGTGCC CATGGAAGGT ATCGTGATTG AAAGTGGCGC CATCGCCCTG
GAAGTCAATG GGCAGACCAA GCAGTCCTCC AATGTGGACA AGCTGATCTG GAATATCCGT
GAACTCATTG CCGATCTCTC CCTGTTTTAC CACCTGCAAC CGGGTGATTT GATTTACACC
GGCACGCCCG AAGGTGTCGG TCCGGTGGTG GTTGGTGACA AGATTACCGG TCGCGTGGAA
GGTGTGGCCG AAGTGGCCCT GACGGTCGGC GCGCCCAAGT AA
 
Protein sequence
MTQYLFNPPP AMSVPVRGLD ARFPINRLFF VGRNYHAHAV EMGRPVDKSV ERPFYFTKAP 
QTLTDSGATV AYPPETSNYH FEMELVLAIG KAGFRVRAED AHTLIYGYAA GLDMTRRDLQ
LVARDKGRPW DLGKDVEQSS VCSEIVPMEG IVIESGAIAL EVNGQTKQSS NVDKLIWNIR
ELIADLSLFY HLQPGDLIYT GTPEGVGPVV VGDKITGRVE GVAEVALTVG APK