Gene Pnap_2452 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2452 
Symbol 
ID4689173 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2595386 
End bp2596024 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content62% 
IMG OID639835462 
Productmaleylacetoacetate isomerase 
Protein accessionYP_982679 
Protein GI121605350 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0625] Glutathione S-transferase 
TIGRFAM ID[TIGR01262] maleylacetoacetate isomerase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTCT ACAACTTCTT TCGCAGCGGC ACATCCCACC GGCTGCGGAT TGCGCTCAAC 
CTCAAGGGTC TGGGCTACGA TTACGTGGCA GTGGACCTGC GCAAGAGCGA ACACCAGGGT
GCAGCCTTCA AGGCACTCAA TCCGCAGGGC CTGGTGCCCG CGGTGGTGGA TGGGGACCAA
GTGCTGACGC AGTCTGTCGC CATTATCGAA TGGCTAGAAG AGCGCTACCC CACGCCCGCG
CTGCTGCCCG CCGATTTGAA CGACCGGGCC CATGTGCGGG CGCTGGCGGC CATCGTCGGC
TGCGACATCC ATCCGGTCAA CAACAAGCGC ATTCTGGACA CGCTGCGCGC CAGCTTTGGC
GCAGATGATG CCGCCATCAA CCAATGGTGC GGCACCTGGA TCGGTGATGG TTTTGATGCT
TATGAAGCCC TGCTGGCGGC CGATACCCGG CGCGCTGGTT TCAGCTTTGG CTACGGACCC
AGCATCGCCG ATGTGTACCT GATTCCCCAA ATTGAAAGTG CGCGTCGGTT CAAGGTAGAC
CTGGGGCGCT GGCCATTGAT CATGGAGGTG GATGCGCAGT GTGCCGCTCT GGAGGCTTTC
CAGCGGGCGA CACCCATGGC CCAGCCAGAC GCGTCGTAA
 
Protein sequence
MKLYNFFRSG TSHRLRIALN LKGLGYDYVA VDLRKSEHQG AAFKALNPQG LVPAVVDGDQ 
VLTQSVAIIE WLEERYPTPA LLPADLNDRA HVRALAAIVG CDIHPVNNKR ILDTLRASFG
ADDAAINQWC GTWIGDGFDA YEALLAADTR RAGFSFGYGP SIADVYLIPQ IESARRFKVD
LGRWPLIMEV DAQCAALEAF QRATPMAQPD AS