Gene Pnap_2448 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2448 
Symbol 
ID4689939 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2591158 
End bp2592567 
Gene Length1410 bp 
Protein Length469 aa 
Translation table11 
GC content61% 
IMG OID639835459 
ProductUBA/THIF-type NAD/FAD binding protein 
Protein accessionYP_982676 
Protein GI121605347 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0476] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.647921 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGTCGA CCGCAGCGCT GGACATCATT TTTCTGGAAT CCCATGAAGC GGCCCTGCGC 
GCGCTGCTTC ATCGGGAGAA CGGCTCGGAG GCCGCTGCCT ATGTGTTGTT TGGCAAAGCC
GAAATTGCGG CCGATCCTTG GTCCAAGCAG CCGCGCATCC GTCTGATCTC GCACGAGGTA
GTACCCATCA CATCCGACGA GATGGTCTCG TCCTCCTCGG TGCACGTCAC GTGGTCAACG
CAGGGGTTCA TGCGGCTGCT GGGCCTGGCA CAGCACCGTA ACCTCGTCCC CGCACTGGTT
CACACGCATC CAGGCGCGGG CGCATTTTTC TCCGACCAGG ACGATCGCAA CGAAGCCGAA
CTAGCGCGCA CCACCTTCAA CAAGGGTGCA CAGGGACTTG CCAGTATGGT CTTCGGTCAG
CACGATGCCA TCGTGGGGCG TCTGTGGAAA TCAGCCAAGG CATCCACGAA GGCGTCGTCC
ATCTCCATTG TCGGAAGCAA GATCAAGATC TGGCGCGCGG ACGCTGGACG CGAAGATACG
GAGTTTCTAG CTCGGCAGGC AGCACTTTTC GGCAAGGGAT TCAATCCCAT CGTGCGGGCA
CTGCGAGTAG GGGTGATCGG TTGCGGTGGA ACGGGGAGTG CCGTGGTTTC GCTGCTGACC
CGGCTGGGTG TCGGGCATCT CGCATTGATG GACAACGACA CGATCGACAC GACCAATCTC
AACCGTGTCC ACGGATCGCG CGCCGCCGAT GTACCCGCGA AGCTGGCCAA GGTAGACATC
CTCGCACGTG AAATCGAGGC TGGCGGCTTG GGCACGCAGG TGGTTACTCG GCGTGCATGG
GTGGGCGACC CATCGCTACG TGACGTTCTG CGGTCTTGCG ATGTGCTTTT CGGCTGTACC
GACGACAACC AGGGTCGGCT CACCCTGAAC CGACTCGCCC ACTACTACGG CATCCCGTTG
ATCGACGTTG GGTTGCGCAT GCGGTCGGCC AAAAGCGGTG TGGACTACGA TATGACGGGC
CGCGTCACGA CAATCAGACC GGGCAACCCT TGCCTGATTT GCCTTGGCGT CGTCAACGCC
CAGCGTGCTG CAGCCGAAGG ATTGCAGCGC AATGATCCAG CGGAGTTTGA ACGTCGCAAG
GCCGAAGCGT ATGTGGAGGG AGGTGGCGAC CCAGCCCCTG CAGTGGTTAC GTTCACTACC
AGTATTGCTT GCGCCGCAGT GGATGAGTTG ATTCAGGGTT TGACAGGGTT CCGCGGCCAA
GGTGGCATGA CGCACAACCG CATTCGCCGA TTCGACCGTG TGGAGGATCG TTCAATGACG
TGTCGACCGA TTCCGACATG CCCTGTTTGC GGAACCGAGG ACACCTGGGG CCGCGGTGAC
GTGAACCCCT TTCTTGGCGT GATCGGGTAG
 
Protein sequence
MMSTAALDII FLESHEAALR ALLHRENGSE AAAYVLFGKA EIAADPWSKQ PRIRLISHEV 
VPITSDEMVS SSSVHVTWST QGFMRLLGLA QHRNLVPALV HTHPGAGAFF SDQDDRNEAE
LARTTFNKGA QGLASMVFGQ HDAIVGRLWK SAKASTKASS ISIVGSKIKI WRADAGREDT
EFLARQAALF GKGFNPIVRA LRVGVIGCGG TGSAVVSLLT RLGVGHLALM DNDTIDTTNL
NRVHGSRAAD VPAKLAKVDI LAREIEAGGL GTQVVTRRAW VGDPSLRDVL RSCDVLFGCT
DDNQGRLTLN RLAHYYGIPL IDVGLRMRSA KSGVDYDMTG RVTTIRPGNP CLICLGVVNA
QRAAAEGLQR NDPAEFERRK AEAYVEGGGD PAPAVVTFTT SIACAAVDEL IQGLTGFRGQ
GGMTHNRIRR FDRVEDRSMT CRPIPTCPVC GTEDTWGRGD VNPFLGVIG