| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2446 |
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| Symbol | |
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| ID | 4689128 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 2586714 |
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| End bp | 2590139 |
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| Gene Length | 3426 bp |
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| Protein Length | 1141 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639835457 |
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| Product | UvrD/REP helicase |
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| Protein accession | YP_982674 |
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| Protein GI | 121605345 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGCGA CCGAAGCCGC ACGGCGCGAG GCAGAACGCA TCCATCTAGC GGCGGTCGCA
GCGGGCGACG ATCCTTGGAA CCTGCTAGAA CTCGTCAGCC GCGAAGCGGC TCGGCGAGAC
CTTGATGTGT ATGCTTTACC ACAGGGCGAC TCCGCACTGA AAAGCGGGCG TGCGGTATTC
GATAGCCAAG CCGGAAGCAT TTTGTACGAA GATACTGGTT CGGTGTTCGA CCGCGCCTTT
CTGATCGCTC ATGAACTGGG ACATGTCGTC TTGGAAGGTG GCATGCGGGA CGCGGTAACG
GAGGAAGTCG AACCAGACCG TTCGGCGGAG GATGCGCCAG TCGGCATCGA AAGAGTGCTT
GACTATGGCG CCCGGGAACG CCGCGAGGTC CGTATGGACC TCTTCGCCCG CGAACTCCTG
TTGCCGCGCT CGGTCGCCCG CCATCACCAC GTTGATGGTA GCTGCTCTTC TGCCGACATC
GCCAATCGTC TTGGCGCACC CTTGCAGGTA GTCCAGCAGC AACTTCTGGA TGCACTGCTC
CTGCCGATCG AACCAACCAC ATCCATACAG CCTGCCGCCA CAGCGGCGGT ATTGACTACA
GACCTGACGC AGATTGCGGC GGCCAACCAT CGCAACACTG CGTTTCAGTT GCAGGCCGGT
CCAGGCACGG GCAAAACCAG AACGCTGGTG CAGCGTATCC AGAGTCTTCT GACTGACGGC
GTGGACCCGA TGTCCATTCT TGTCCTCACG TTCTCCAACA AGGCGGCCAA CGAGTTGAGC
GAGCGACTCG CCGCAAGCAA CCCAAAAGCG GCCGCAGCGA TGTGGATCGG TACGTTTCAT
GCATTCGGTT TGGATATCGT CCGCCGTTTT CACGACAAGC TGGGACTACC TGCGGGACCT
CGTCTCATTG ATCGATCCGA AGGCATCGAA TTGCTGGAAG ACGAGTTGCC ACGACTCCCG
TTGCACCACT ATCGCAACCT ATGGGATCCA GCGCTCGATC TCAGCGACAT GCTCAGTGCG
ATTTCACGCG CCAAGGACGA GGTGATCGAC GCTGTTGGCT ACCGGGCATT GGCCCAAGCC
ATGGCACAGA ACTGCGCTGA TGATGCCGAT GCGACGATGC GTGCTGAGAA GTGCATGGAA
GTCGCTTTGG TCTACGAAAC CTACGAGCGC CTGATGACTG CAAAGCAGTT GATCGACTTT
GGCGATCTTG TCGCCCAGCC TGTACGCCTT GTCGAAGCCG ATGCCGAAGT GAGAAATGCA
CTAAGGGCAC GGCACAAGCA TGTCCTCGTC GACGAATACC AGGACGTGAA CCGTTCTTCC
GTACGTCTTT TGAAAGCTAT CGTCGGGGAT GGACGTGACC TCTGGGTTGT TGGCGATGCC
CGTCAATCCA TTTATCGCTT CCGCGGCGCA TCGGCCACCA ACATGGCCCA ATTCACCTTG
GATTTTCCCG GTGCTCAAGT TGATCAACTG GGTATCAACT ATCGGTCTCG ACAGGAAGTC
ATCGATGTTT TCACAGCCTT CTCCGGCACG ATGAAGGCAT CGACAGGCGC ATTGCCGTTG
CATTTAAAAG CGAGCCGAGG CGCCTCCGGT GTCACACCAG ATTTCAGGGT TGTGAGCACA
ACGAATGATG AAATTTCGGC GATAGCCGCC GCGATCCAGG CCCAACGCGA CGCGGGAACG
GCTTACCGCG AACAGGCCCT TCTGTGCGCA TCCAACGCCC GTCTGAGCGA AATCGCTGAG
GGCCTGGAAG CCAGAGGCAT CCCGGTGCTT CATCTCGGAA GCCTGTTCGA GCGACCTGAG
ATCAAGGATC TCCTCGCCTT GCTTTCCATG TTGAACGACC CCTATGCCGT CGGTCTGGTG
CGGGCCTCCA CGATGCCATC GTATGAGTTG CCACTGCAAG ATATCGCACA GATCATCGAG
CGCCTGCGTG AAAGCAAAGT TGCGGCGCTC GACTGGCGGC TCGCGGGGAA CTGGCCACCG
GAACTCGCCG GAACGAGCAA CGCCACATTG GCGCGCGTGG CTGCACTTTT CGATGGGATG
AGCCCGACCG GCAACCCGTG GACCATTTTG TCCACCTGGG TGATCGACCG TCTTGGACTC
GCCAAGGTCC TGTACCTGGC AGACGACGCG CAAAGCAGAA TGAAAGGTCT GGCGCTGTGG
CAATTCCTCA ACTTCTGCCG GCAACAACCT TCGGGTGCCG GGGCACCCTG CACGCGCCTT
CTTGATCGAA TTCGCCGACT CGTTCTGCTT TCGGAAGATC GCGGCTTGCG CCATTTGCCA
GGAGTCGTCG ACGGCATCGA TGCGGTACGT CTGATGACGA TCCATGCCAG CAAAGGACTG
GAGTTTCACA CCGTTCATAT CCCCGGCATG GTGACCTCAG GTCTGCCGCG CAACAACATG
GCACCGCGCT GCGTGCCGCC GGACGGTCTG ATTCATGGCT CAGATGGAAT CACCGGATTG
GAAGCGGTGA AATCTGGGCA CGAGGAAGAA GAGGAATGCC TGTTCTTCGT GGCTCTGTCC
CGCGCCCGCG ATCGGCTCTT TCTCTATGCA TCATCGGTTC AGTCCGACGG CAGAGCGCGC
AATCCTTCGA AGTTCCTGAC CTCCATCCGA CACCTTCTGA TTCACTCGCC CAATCCACCG
CAGCGAAGTG CCAAGCTGCG GGCGAAGGCA TGCTTGCAAG TTGCCTGGGC GCAAAAGCCG
GTCTGGACCG ATAGCCAGGT CAACCTGTTC GCGCGATGTC CACGTCGCTT TTTTTACACC
CACGTCCTGA AACTCGGAGG CCGCCGTACG GAAACGGCCT TCATGAAGAT GCACAACGTT
GTCGGGGACG TATTCGATTG GCTGAAGACC ACGCATGAGA TGACGGTGCC AACCGAAGCC
GAACTCGGCG CGCGCTTCGA CCAGGCATGG CAGGTAAAGG GCGCAATCGA CCATGGCTAT
GCAGAAGATT ACCGGCGCAT CGCGCGCCGG CTAGTGGACT ACCTCATCGA AACTCGAAGT
CGCGGCGTAC TTGCGCCGGC AACCCCGATC TCGCTCGGGT GGGTGGAAGG CGAAATTCTC
GTCCGGCCGG ACAGTGTCGC CCGGGGCGAC AAGGGGCAGA TCGTCGTTCG GCGGGTAAAA
ACCGGCAAAC CAAGGTCCAA CGCTTTCGAT GACATCGAGT ACACGCTACT ACATCTCGCG
ACCATGCAGA CTTATGGTGG GTCGGCCCAG GTCGAGGTCA CCTACCTGAC CAGCGAGACG
ACGCAGCCGA TGGATCTCAC CGAGCGAAAA CTCAAAACGC GCGGTGAGAA GGTCCAGGAG
ATCGTCAGAC GCGTCCGCGC TGGCGATTTT CCTGTGAAGG AAGAAGCGCG CGCTTGCCCA
CGTTGCCCCA GCTTCTTCAT CTGCGGCGAC CTTCCGGCCG GCGCGATCAC CATAAAAAAT
GTTTGA
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| Protein sequence | MDATEAARRE AERIHLAAVA AGDDPWNLLE LVSREAARRD LDVYALPQGD SALKSGRAVF
DSQAGSILYE DTGSVFDRAF LIAHELGHVV LEGGMRDAVT EEVEPDRSAE DAPVGIERVL
DYGARERREV RMDLFARELL LPRSVARHHH VDGSCSSADI ANRLGAPLQV VQQQLLDALL
LPIEPTTSIQ PAATAAVLTT DLTQIAAANH RNTAFQLQAG PGTGKTRTLV QRIQSLLTDG
VDPMSILVLT FSNKAANELS ERLAASNPKA AAAMWIGTFH AFGLDIVRRF HDKLGLPAGP
RLIDRSEGIE LLEDELPRLP LHHYRNLWDP ALDLSDMLSA ISRAKDEVID AVGYRALAQA
MAQNCADDAD ATMRAEKCME VALVYETYER LMTAKQLIDF GDLVAQPVRL VEADAEVRNA
LRARHKHVLV DEYQDVNRSS VRLLKAIVGD GRDLWVVGDA RQSIYRFRGA SATNMAQFTL
DFPGAQVDQL GINYRSRQEV IDVFTAFSGT MKASTGALPL HLKASRGASG VTPDFRVVST
TNDEISAIAA AIQAQRDAGT AYREQALLCA SNARLSEIAE GLEARGIPVL HLGSLFERPE
IKDLLALLSM LNDPYAVGLV RASTMPSYEL PLQDIAQIIE RLRESKVAAL DWRLAGNWPP
ELAGTSNATL ARVAALFDGM SPTGNPWTIL STWVIDRLGL AKVLYLADDA QSRMKGLALW
QFLNFCRQQP SGAGAPCTRL LDRIRRLVLL SEDRGLRHLP GVVDGIDAVR LMTIHASKGL
EFHTVHIPGM VTSGLPRNNM APRCVPPDGL IHGSDGITGL EAVKSGHEEE EECLFFVALS
RARDRLFLYA SSVQSDGRAR NPSKFLTSIR HLLIHSPNPP QRSAKLRAKA CLQVAWAQKP
VWTDSQVNLF ARCPRRFFYT HVLKLGGRRT ETAFMKMHNV VGDVFDWLKT THEMTVPTEA
ELGARFDQAW QVKGAIDHGY AEDYRRIARR LVDYLIETRS RGVLAPATPI SLGWVEGEIL
VRPDSVARGD KGQIVVRRVK TGKPRSNAFD DIEYTLLHLA TMQTYGGSAQ VEVTYLTSET
TQPMDLTERK LKTRGEKVQE IVRRVRAGDF PVKEEARACP RCPSFFICGD LPAGAITIKN
V
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