| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2439 |
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| Symbol | rimO |
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| ID | 4689340 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 2578044 |
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| End bp | 2579429 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639835450 |
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| Product | ribosomal protein S12 methylthiotransferase |
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| Protein accession | YP_982667 |
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| Protein GI | 121605338 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01125] MiaB-like tRNA modifying enzyme YliG, TIGR01125 |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGAAA TAAAAGAAAA AATCCCGCGT ATAGGTATGG TATCGCTAGG ATGCCCCAAG
GCATTGACCG ATTCGGAGTT GATCCTGACG CGGCTTAGTG CCGAGGGCTA CCAGACATCC
AAAACCTTTG AAGGTGCCGA TCTGGTCATT GTCAATACCT GCGGCTTCAT TGATGACGCC
GTCAGGGAAA GCCTGGACAC GATTGGCGAG GCGCTGGCTG CAAACGGAAA AGTTATTGTG
ACCGGCTGTC TGGGTGCCAA GTCAGGCGAC AACGGCAGCA ACCTGGTGCG CCAGATGCAT
CCCAGTGTCC TGGCAGTCAC CGGTCCGCAT GCGACGCAGG AGGTCATGGA TGCGGTCCAT
CTGAACCTGC CCAAGCCGCA CGATCCGTTC GTGGACCTGG TTCCCAATGC CTTCGGCATC
GCCGGCATCA AGCTCACGCC CAGGCACTAT GCCTACCTCA AGATCAGCGA AGGCTGCAAC
CATCGCTGCA CCTTCTGCAT CATTCCGTCC ATGCGCGGCG ACTTAGTGTC GCGGCCTGTC
GGCGATGTTT TGAGCGAAGC GCGTGCGCTG TTCGAGGGCG GGGTAAAAGA GTTGCTGGTC
ATCAGTCAGG ACACTTCTGC CTATGGCGTC GATGTCAAAT ACCGTACCGG CTTTTGGGAT
GGCAAGCCGG TGAAGACCCG GATGCTCGAA CTGGTCCAGG CGCTTGGCGA GATTGCCGCG
CCGTTCGGCG CCTGGGTACG CTTGCATTAT GTCTATCCGT ACCCGAGCGT GGATGAGATT
CTTCCTTTGA TGGCGACGGG TAAGGTGTTG CCTTATCTGG ACGTGCCCTT GCAGCACAGC
CATCCGGATG TCTTGAGGCG CATGAAGCGG CCTGCCAGCG GAGAGAAGAA TCTGGAACGT
ATTTCGCGCT GGCGTGAGAT GTGCCCCGAG ATCGTCATTC GCAGCACGTT TATTGCTGGC
TTTCCCGGTG AAACCGAAGC TGAATTCGAA CACTTGCTTG ATTTCATGCG CGAGGCAAAG
ATTGACCGTG CGGGCTGTTT TGCCTACAGC GCAGTGCAGG GCGCAACGGC CAACGACATT
CCGGGAATGC TCCCGCTGGG AGTGCGTGAA GAGCGGCGGG CACGCTTTAT GGCTGTGGCG
GAAGCAGTTT CAAGCCAGAA ACTGCAACAA CGCGTTGGCG CGACCATGCA AGTACTGGTG
GACCATGCGC CAGCATTGGG ACGAAAGGGC GGAACTGGCC GCTCCTATGC AGACGCGCCC
GAGATTGATG GCGTGGTCAA GCTGCTGCCG CCCGAGAAAA TCAGTAAAAC CATGAAGGTT
GGCGAGTTCA CCCGTGCCCG CATTGTCGGG GTTCAGGGAC ACGATCTGAT TGCAGTGCCT
GTCTGA
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| Protein sequence | MNEIKEKIPR IGMVSLGCPK ALTDSELILT RLSAEGYQTS KTFEGADLVI VNTCGFIDDA
VRESLDTIGE ALAANGKVIV TGCLGAKSGD NGSNLVRQMH PSVLAVTGPH ATQEVMDAVH
LNLPKPHDPF VDLVPNAFGI AGIKLTPRHY AYLKISEGCN HRCTFCIIPS MRGDLVSRPV
GDVLSEARAL FEGGVKELLV ISQDTSAYGV DVKYRTGFWD GKPVKTRMLE LVQALGEIAA
PFGAWVRLHY VYPYPSVDEI LPLMATGKVL PYLDVPLQHS HPDVLRRMKR PASGEKNLER
ISRWREMCPE IVIRSTFIAG FPGETEAEFE HLLDFMREAK IDRAGCFAYS AVQGATANDI
PGMLPLGVRE ERRARFMAVA EAVSSQKLQQ RVGATMQVLV DHAPALGRKG GTGRSYADAP
EIDGVVKLLP PEKISKTMKV GEFTRARIVG VQGHDLIAVP V
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