Gene Pnap_2429 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2429 
Symbol 
ID4688285 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2565649 
End bp2566443 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content64% 
IMG OID639835439 
Productphosphoadenylyl-sulfate reductase (thioredoxin) 
Protein accessionYP_982657 
Protein GI121605328 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0175] 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes 
TIGRFAM ID[TIGR00434] phosophoadenylyl-sulfate reductase (thioredoxin) 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.149662 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCA TTTCCCTCTA CGCCAAACCG TCGCCCGAAT TTGCGCAAAA GCTTGCGCAC 
AGCCTGGCGC TGATCAAGAC CGCCGCCACC GAGTATTCGC CGCTGACGCA GGCGTCCAGC
CTGGGCTGCG AGGACATGGT CATCACCCAC CTGATGCACG AAGCCGGCCT TGACAACGCG
AGCGCCAGCA TCTTCGTGCT CGACACCGGC ATGCTGCACC TTGAGACCGT CGCGCTGATT
GGCCGCATCG AGGAACGCTA CCCGTTCAAG GTCGATGTGT ACCACCCCGA CGCCGACGCA
GCCTCGGCCT TTGTCGAGGA AAACGGCTCG CAGGCCATGT ACAAAAGCCT GGCCTTGCGC
AAGCAGTGCT GCCACATCCG CAAGATGGAG CCGCTGGAGC GCGCGCTGGC CGGCAAGAAA
GGCTGGCTGA CCGGCCTGCG CCGCGAGCAG TCCGCCGCCC GGGCCGAAGT ACACGACATC
GAGCAGCAGC CCGAGCGCGC CAAGATCAAC CCGCTGGTCG AATGGACCCA GGGCGACATC
TGGCACTACA TCGCGCTCAA CGAGATTCCC TACAACCCGC TGCACGACCA GTTCTTCCCC
AGCATCGGCT GCGCGCCCTG CACCCGCGCC GTGACGCTGG GCGAGGATTT CCGCTCCGGC
CGCTGGTGGT GGGAAAACGA GAGCGCCAAG GAGTGCGGCC TGCATGTCGC GGCCGACGGC
ACCCATGAAG CGCAGGAACC CGCCGCGTTT GAACCGCTTT CCAGCATCAT CCCTATCCGA
GAAATACAAG CATGA
 
Protein sequence
MSAISLYAKP SPEFAQKLAH SLALIKTAAT EYSPLTQASS LGCEDMVITH LMHEAGLDNA 
SASIFVLDTG MLHLETVALI GRIEERYPFK VDVYHPDADA ASAFVEENGS QAMYKSLALR
KQCCHIRKME PLERALAGKK GWLTGLRREQ SAARAEVHDI EQQPERAKIN PLVEWTQGDI
WHYIALNEIP YNPLHDQFFP SIGCAPCTRA VTLGEDFRSG RWWWENESAK ECGLHVAADG
THEAQEPAAF EPLSSIIPIR EIQA