| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2396 |
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| Symbol | |
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| ID | 4689815 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 2526501 |
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| End bp | 2528681 |
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| Gene Length | 2181 bp |
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| Protein Length | 726 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639835406 |
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| Product | Na+/solute symporter |
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| Protein accession | YP_982624 |
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| Protein GI | 121605295 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4147] Predicted symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family
[TIGR03648] probable sodium:solute symporter, VC_2705 subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.79359 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGATT TTTTTGGTCG CCGTGAAGGC GTTGCGCACT CCAAAAAACA GTTCAAGTCC
CAACTGGACC GCGTTTATCG CTGGTTCACG CTGGGTTTTG TCGTTTATGT GCTGCTGCTG
GGGGGGCTGG AGCGCTTGGG CATGCCGCAC TCATGGATAG GCATGACATT CTTGCTGTCC
ACGATTGCTT TGTATGCCGG TATCGGCATC ATGACCCGCA CCACCGATGC CGCCGAATAT
TACGTGGCGG GCCGCCGAGT CCCGGCGATT TATAACGGGA TGGCAATAGG GGCCGACTGG
ATGTCGGCGG CTTCATTCCT GGGCCTGGCC GGCACGCTGT ACCTGACGGG TTATAGCGGT
CTGGCATTCA TCATGGGATG GACGGGTGGC TATTGTCTGG TGGCGCTGGT GCTGGCCCCT
TACCTGCGCA AGTTCGGGCA GTTCACCATT CCGGATTTCC TGGGCGAGCG CTACGGCGGG
CATCTGCCGC GCTTTATGGG TTTGCTGGCA GCCATCCTGT GTTCATTCAC TTATCTGGTG
GCGCAGATTT ACGGCGTCGG ACTCATCACG TCCTACCTGA CCGGTATTGC TTTCGAGCTG
GGTATTTTTC TGGGGGTGGG CGGCATTTTG GTTTGCTCAT TTTTGGGCGG AATGCGAGCG
GTGACCTGGA CGCAGGTGGC GCAATACATC ATTTTGCTGG TGGCCTACCT GATTCCGGTC
GTCTGGCTGT CGGTCAAGCA GACCGGCATT CCTGTCCCGC AAGCGGTTTA CGGCTTTCAA
CTGGAGAAAG TGACCGCCAA GGAAAAAGAG CTGGCGACAG ACCCCAAGGA GTTGGAGGTT
CGTGCCCTAT TCAGCAAACG CGCAGAAGTC CTGGCCGAAA AAATGAAGCA TCCGGAGCTT
TCGATGGCTG CCGACAAACT GGCTGCCACC AAAAAACTGG CAGCCCTGAA GGCTGGCAAT
GCGTCGGTAG CCGAGGTTTC TGCCGCTGGC AAGGCGTTGG CAGCCTTGCC GAAAGATGAG
AGCGCGGCAC TTCGTGAATG GGCTATCGCC AAAACAGCAG ACGAAATCAA AAGCCAGCCA
CTCAATGGCA TGCCTGCCCA TGCCGCCCAG TTTTTGGGCA ACCCTGATGG CACAGTTCAG
GAAAAAGAGC TTTACGACAC GTCACGGCGC AACTTCCTGG CGCTGGTTTT TTGCCTGATG
GTCGGGACAT CGGCCTTGCC GCACATCCTG ATGCGCTATT ACACCGTGCC CAGCGTTCGT
GAGGCACGGC AGTCCGTCAC CTGGTCACTG TTTTTCGTTT TTCTGCTGTA TTGCACCGCA
CCTGCGCTGG CAGTGCTGGT GAAGTATGAA ATTTTTACCG TGCTGCTCGG TACACCCTTT
GACCAACTGC CCGCATGGGT GAATGAGTGG AACAAGGTCG ATCCGGCGCT GCTGTCGGTG
GTTGATGTCA ACAAAGACAA TGTCTTGCAA CTCAATGAAA TGACCATGGG TGGCGACATT
GTGGTGCTGC TCACGCCTGA ACTGGCGGGG TTGCCTTACG TTGTTTCAGC GCTGGTGGCG
GCAGGTGGAC TGGCCGCCGC ACTCTCTACC GCAGATGGAC TGCTGCTGGT CATTGCCAAT
GCGCTGGGAC ATGACCTGTA CTACAAGATG ATTGATCCGA ATGCCTCAAC CGTGAGCCGT
GTCACGCTGT CCAAAATACT GCTGCTCATC GTTGCCCTGC TGGCGGCTTA TGTAGCAGCC
CAGAAACCGG CTGATATCCT GTTTCTGGTA TCGGCCGCTT TTTCATTTGC AGCGTCGTCG
TTTTTTCCGG CGCTGAGCAT GGGTATTTTC TGGAAACGCG CTACCGGCAC GGCGGCGACT
CTGGGAATGG TGTCGGGCCT GAGCGTGACG ACCTACTACA TGGTAACTAC CCAGCCGTGG
CTACGCACCA CCTTCGGCAT TACCTCGCCG ATTCAACTCT GGTGGGGAAT TGATCCCATA
TCAGCCGGTT TGTTCGGCGT GCCTGTTGGC TTTGCGGTGA TCATCCTGGT CAGTCTGGTG
ACACGGCCGC CCAGCCAGGA CATGCAAGCG CTGCTGGAGT ACATCCGTTA TCCGGATCTG
AAAGCCCATG ACAGGTCTTT TGCAGCACCA GCGCCGCGTC AGGGCAGGGC TGTTTCGCAT
CAAGCTGGTG ACGGGCTATA A
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| Protein sequence | MADFFGRREG VAHSKKQFKS QLDRVYRWFT LGFVVYVLLL GGLERLGMPH SWIGMTFLLS
TIALYAGIGI MTRTTDAAEY YVAGRRVPAI YNGMAIGADW MSAASFLGLA GTLYLTGYSG
LAFIMGWTGG YCLVALVLAP YLRKFGQFTI PDFLGERYGG HLPRFMGLLA AILCSFTYLV
AQIYGVGLIT SYLTGIAFEL GIFLGVGGIL VCSFLGGMRA VTWTQVAQYI ILLVAYLIPV
VWLSVKQTGI PVPQAVYGFQ LEKVTAKEKE LATDPKELEV RALFSKRAEV LAEKMKHPEL
SMAADKLAAT KKLAALKAGN ASVAEVSAAG KALAALPKDE SAALREWAIA KTADEIKSQP
LNGMPAHAAQ FLGNPDGTVQ EKELYDTSRR NFLALVFCLM VGTSALPHIL MRYYTVPSVR
EARQSVTWSL FFVFLLYCTA PALAVLVKYE IFTVLLGTPF DQLPAWVNEW NKVDPALLSV
VDVNKDNVLQ LNEMTMGGDI VVLLTPELAG LPYVVSALVA AGGLAAALST ADGLLLVIAN
ALGHDLYYKM IDPNASTVSR VTLSKILLLI VALLAAYVAA QKPADILFLV SAAFSFAASS
FFPALSMGIF WKRATGTAAT LGMVSGLSVT TYYMVTTQPW LRTTFGITSP IQLWWGIDPI
SAGLFGVPVG FAVIILVSLV TRPPSQDMQA LLEYIRYPDL KAHDRSFAAP APRQGRAVSH
QAGDGL
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