| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2388 |
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| Symbol | |
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| ID | 4688401 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 2519610 |
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| End bp | 2520623 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639835398 |
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| Product | tRNA-dihydrouridine synthase A |
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| Protein accession | YP_982616 |
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| Protein GI | 121605287 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00742] tRNA dihydrouridine synthase A |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0913736 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAATCC CCGTTTCTAG CGACGTATCC GTCCCTGCTG ATAATCCATG GCGCCTGAGC
GTGGCCCCGA TGATGGATTG GTCTGACCGG CACTGCCGTT ACTTTCACCG CCTGCTGTCG
CGTCATGCGT TGCTGTACAC CGAGATGGTG ACCACTGGTG CCCTGATCCA TGGCGATGTG
GGGCGGCATT TGCGCTTCAA CGCCGAGGAG CATCCGGTCG CCTTGCAGCT CGGCGGCAGC
GAGCCGGCCG ATCTGGCGCA TTGCGCCCGG CTGGGCGAGC AATGGGGTTA CAGCGAAATC
AATATCAATT GCGGCTGCCC CAGTGAGCGG GTGCAGCGCG GCGCTTTTGG CGCCTGCCTG
ATGGCCGAGC CCAAACTGGT GGCCGATTGC GTCAAGGCCA TGGTCGATGC GGTCAGCGTG
CCCGTCACGG TAAAGCACCG CATCGGCATC GACCGCGAGG AGCGCTATGA ATTTGTGCGC
GATTTTGTCG GTACGGTCAG TGAAGCCGGT TGCGATACTT TTATCGTGCA TGCCCGCAAC
GCCTGGCTCA AAGGCTTGAG TCCGAAAGAA AACCGGGAAG TGCCACCGTT GCGCTACGAA
CTGGTGCATC GCCTGAAGAA GGAGTTTGCG CATCTGACGA TTTGCGTCAA CGGTGGCATC
ACCACCGGCG AACAGGTGCA AGGCCAGCTG CTTGAACTTG ACGGCGTGAT GATTGGCCGG
GAGGCTTATC ACAACCCCTG GTGGCTGGCC TCCTGGGATG CGGACTTTTT TGGTGCTGGT
GGCGAGAGCA TCACGCGTGA ACAGGTCGAG GCGCAGATGT GCGATTACAT GGTGCGCGAA
GCGGCCGGGC ACGGCACACC ATTCAGCGCC ATTGCCCGCC ATATGCTGGG TTTGCGGCAC
GGTTTGCCGG GCTCGCGCCG CTGGCGCCAG GTGTGGAGTG ACCACAAGCT GAAAACCATG
GATCCGCGCG ACGTGATGAT GCTGGCGCAT GCGGATGTTC AAAAAGCAGC CTAA
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| Protein sequence | MSIPVSSDVS VPADNPWRLS VAPMMDWSDR HCRYFHRLLS RHALLYTEMV TTGALIHGDV
GRHLRFNAEE HPVALQLGGS EPADLAHCAR LGEQWGYSEI NINCGCPSER VQRGAFGACL
MAEPKLVADC VKAMVDAVSV PVTVKHRIGI DREERYEFVR DFVGTVSEAG CDTFIVHARN
AWLKGLSPKE NREVPPLRYE LVHRLKKEFA HLTICVNGGI TTGEQVQGQL LELDGVMIGR
EAYHNPWWLA SWDADFFGAG GESITREQVE AQMCDYMVRE AAGHGTPFSA IARHMLGLRH
GLPGSRRWRQ VWSDHKLKTM DPRDVMMLAH ADVQKAA
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