Gene Pnap_2386 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2386 
Symbol 
ID4688464 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2516161 
End bp2517435 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content57% 
IMG OID639835396 
Producthypothetical protein 
Protein accessionYP_982614 
Protein GI121605285 
COG category[S] Function unknown 
COG ID[COG2718] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCCAGC AAGTCATTGA CAGACGCTTG TCGGGCAAGA ACAAATCCAT AGGAAACCGG 
GAGCGTTTTC TGCGCCGCTA CCGCAAGCAG ATTCGGGAGG CTGTGCGTCA GGCTGTATCT
GGCCGCAGCA TTCACGATAT TCAGCAGGGC GAGGACATTA CCCTGCCGCG ACGTGATGTG
TCGGAGCCGG TGTTTGGCCA TGGACCAGGG GGTAGCCAGG AGCGGGTGTA TCCAGGCAAT
AAGGACTATG TGCGTGGCGA CCACATTGCC CGCCCGAAAG GTGGGAGTGG TGGCGGCGGC
CAGGGCCCTG GCGCCGGTCA GGATGGCAGC AGCGAAGACG ACTTCGAGTT CCGCATCACA
CGCGAAGAAT TCATGCAGTA CTTTTTCGAC GATCTGGCTC TGCCGCATCT GCTGCGCACA
CAGCTATTGC CAGATGTGCC GGAATGGAAG ACGCATCGTG CCGGTTTCGT TTCCGAAGGA
ACACCGACCA ACCTGCATGT GGTGCGGTCA ATGCGCAAGG CGCTCAGCCG GCGGATCGCC
ATGGGGGGCG ATGCCCGGCG CCAGTTGCGC AAACTGGAGT TGTTGCTGGC CACGATGCTG
CACGATGCAA GCACCCCGCG CAGCGAGATA CTTGCGCTGA ATGCTGAAAT TGAAGCATTG
CGGCACCGGC TCCTGAAAAT TCCGTTTCTC GATCCATTCG ACCTGCGATA CCGCAACCGG
GTCAAAACGC CATTGCCGGC TTCCAAAGCC GTCATGTTCT GTTTGATGGA TGTGTCGGGC
TCGATGAACG AGGCGCGCAA GGACTTGGCC AAGCGTTTTT TCATTTTGCT GTACCTTTTT
CTCATGCGGC ACTATGAGAA AACCGATGTG ATTTTTATCC GCCATCACAC CCAGGCCACC
GAAGTTTCCG AAGACGAATT CTTCCACTCG ACAGAAAGTG GCGGCACCGT TGCCTCCAGT
GCCTTGACGC TGATGCACCA GATCATTCAG GAGCGCTATC CGTCGAATGA ATGGAACATC
TATGGCGCCC AGGCTTCAGA CGGCGACAAC TGGCTGCAGG ACTCGTCCAA ATGCCGGGCC
TTGCTGGTTG AAAAGCTGCT GCCGGTATCG CGTTACTTTG CCTATCTCCA GGTCGCCGAG
GAAAGCCAGA ACCTGTGGGA GGAATATGCC TTGGTGCGCA AAAGCCACGC GCACTTCGCC
ATGCAGAAAG TGACCGACCC GTCCGGGATT TATCCGGTGT TCCGCGAACT GTTCAAGAAA
GGACAAACTG CATGA
 
Protein sequence
MLQQVIDRRL SGKNKSIGNR ERFLRRYRKQ IREAVRQAVS GRSIHDIQQG EDITLPRRDV 
SEPVFGHGPG GSQERVYPGN KDYVRGDHIA RPKGGSGGGG QGPGAGQDGS SEDDFEFRIT
REEFMQYFFD DLALPHLLRT QLLPDVPEWK THRAGFVSEG TPTNLHVVRS MRKALSRRIA
MGGDARRQLR KLELLLATML HDASTPRSEI LALNAEIEAL RHRLLKIPFL DPFDLRYRNR
VKTPLPASKA VMFCLMDVSG SMNEARKDLA KRFFILLYLF LMRHYEKTDV IFIRHHTQAT
EVSEDEFFHS TESGGTVASS ALTLMHQIIQ ERYPSNEWNI YGAQASDGDN WLQDSSKCRA
LLVEKLLPVS RYFAYLQVAE ESQNLWEEYA LVRKSHAHFA MQKVTDPSGI YPVFRELFKK
GQTA