Gene Pnap_2380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2380 
Symbol 
ID4688527 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2508212 
End bp2508973 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content61% 
IMG OID639835390 
Producthypothetical protein 
Protein accessionYP_982608 
Protein GI121605279 
COG category[S] Function unknown 
COG ID[COG1434] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCGTT TGAACTTCAA GCCGTGGGCG TTCACCGCTC TGGGCGGCAT GCTGCTCGCG 
CAAAGTGCCT ATTTGGTGAC CGTGAAGGTG ACGCATCTGG GGGTAATCCT TCCGGCCGGT
CTGGGCGCTG TTCTGGTTTT TCTTGGGAGC GTCCAGGCGC CCTGGCAGCA CTGGCTGGCG
TGGAAGTGGG TACAGGCCGG GTTCTGGCTC TGGCTGGTGT CTCTGGGGGC TTTTTTTGGC
CTGCTGGCGC TGCGCCAACA GGGGCAAAAC CTGCAGGGCT TGAGGCCGGA GGTGATTGTG
GTGCTGGGTT CGAGCACGCC CAATGCCCAG CCTTCACCCA CCTTGGCGGA GCGGCTGAAT
CTGGCTTACA CGCTGGCGCA GCAGCATCCA AAGGCTCGGG TGATCGTCAG CGGCGGGGTG
GATTTTCGCC AGACCGTGTC CGAAGCCAGT GTCATGGCCA CTTATCTGGA GGCCAAGGGG
CTGGATAAAA GCCGCATTCT TGTCGAAGAC CGCAGCACCA GTACGCATGA GAACCTGGTG
TATTCCCTGC GCCTGCTGCA GGCTGGCGGG CAGACGCCGC AGGCGGCTAC GGTGCTGGTG
ACGAGTGACT TTCACACCCT GCGGGCGAGC TGGATTGCCA AAAATGCGGG CTGGAAAAAT
GTCGTCACTG CTGGCGCACC TACACCCTTG TACATGCGCT ACAACGCCTG GCTGCGCGAG
TATTTCGCCT TTGTGTCGGG CTGGCTTTTG AGGGAGTACT GA
 
Protein sequence
MMRLNFKPWA FTALGGMLLA QSAYLVTVKV THLGVILPAG LGAVLVFLGS VQAPWQHWLA 
WKWVQAGFWL WLVSLGAFFG LLALRQQGQN LQGLRPEVIV VLGSSTPNAQ PSPTLAERLN
LAYTLAQQHP KARVIVSGGV DFRQTVSEAS VMATYLEAKG LDKSRILVED RSTSTHENLV
YSLRLLQAGG QTPQAATVLV TSDFHTLRAS WIAKNAGWKN VVTAGAPTPL YMRYNAWLRE
YFAFVSGWLL REY