Gene Pnap_2376 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2376 
Symbol 
ID4688207 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2501515 
End bp2502210 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content61% 
IMG OID639835386 
Productelectron transport complex, RnfABCDGE type, B subunit 
Protein accessionYP_982604 
Protein GI121605275 
COG category[C] Energy production and conversion 
COG ID[COG2878] Predicted NADH:ubiquinone oxidoreductase, subunit RnfB 
TIGRFAM ID[TIGR01944] electron transport complex, RnfABCDGE type, B subunit 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.532877 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCGGT GGGACAATAG CGCCGTGATT TCCCCCACCC AAAGCACCCT CTTTGACCGT 
ATCAATGCGG CATTGCCCCA AACGCAATGC ACGCGCTGCG GTTTCGTTGA TTGCGCTGCT
TACGCGCAAG CCATCACCTT GGGGGAAGCG GCCATCAACC AGTGTCCGCC GGGCGGCGCG
GAAGGAATAG CGCGCCTTTC ACGGATCACC GGCTTGCCGG TGCAGCCGCT GAATCCGCTC
AATGGGGTTG AAGCTCCACG CGCGGTCGCC ATCATTGACG AAGCCTGGTG CATAGGCTGC
ACCCTGTGCA TCAAGGCATG CCCTACCGAC GCCATCATCG GCAGCAACAA GCTGATGCAC
ACCGTGATCG AACCCTATTG CACAGGGTGC GAGTTGTGCA TACCGGCTTG TCCTGTGGAC
TGCATCAGCC TGGAAAATCT TACGGGCACC CACACCGGCT GGAACGCCTG GTCGCCCCAG
GATGCCGAAA CCGCCCGAAA ACGCTACGAA TCCCATCGCA TGCAGCACAC GCACGACAAC
AGCGCCAAGC CTGAAAAGCT TCAGGAAAAA GTATCGGCCA CACCAGCAAA GCCGCCGGAC
CCGTCACTCC CGCGCGGGGA CGAAGAGGCG CAACGCAAGC GCGCCGTGAT CCAGGCGGCC
CTGGCAAGTG CCCGGGCACG GCGCAACAAT GATTGA
 
Protein sequence
MERWDNSAVI SPTQSTLFDR INAALPQTQC TRCGFVDCAA YAQAITLGEA AINQCPPGGA 
EGIARLSRIT GLPVQPLNPL NGVEAPRAVA IIDEAWCIGC TLCIKACPTD AIIGSNKLMH
TVIEPYCTGC ELCIPACPVD CISLENLTGT HTGWNAWSPQ DAETARKRYE SHRMQHTHDN
SAKPEKLQEK VSATPAKPPD PSLPRGDEEA QRKRAVIQAA LASARARRNN D