| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2375 |
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| Symbol | |
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| ID | 4688156 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 2499733 |
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| End bp | 2501466 |
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| Gene Length | 1734 bp |
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| Protein Length | 577 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639835385 |
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| Product | polyhydroxyalkanoate depolymerase, intracellular |
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| Protein accession | YP_982603 |
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| Protein GI | 121605274 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG4553] Poly-beta-hydroxyalkanoate depolymerase |
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| TIGRFAM ID | [TIGR01849] polyhydroxyalkanoate depolymerase, intracellular |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGTATC AACTCTATGA ATCCCAGCGT ACCCTGATGG AGCCGTTTGT TGACTTTGCG
CAGGCAGCTG CAAAACTCTA CGGCAGCCCC CTGTCGCCCA TGGGCAAAAC GCCATTGGCC
CAGCGCGTAT CCGCTGGCTA CAGCCTGATG TACCGGCTGG GCAAGGACTA CGAAAAGCCA
TCCTTCGACA TTCATCAGGT CGATGTTGAC AAGGCAGGCG TCAGTCTGGC GATTCATGAA
CGCGTTGAAG TTGACAAGCC TTTTTGCGAA CTGCGTCGCT TCAAACGCTT TACCGATGAT
TCGGCGACCC TCACGCAACT CAAGGACCAG CCAGCGGTGC TGGTCGTGGC GCCCTTGTCG
GGACACTATT CGACCTTGCT GCGCGATACC GTCAAGACGA TGCTCAAGGA CCACAAGGTT
TACATCACCG ACTGGAAAAA CGCCCGCAAC GTGCCTTTGT CCGACGGCGC TTTTCACCTT
GACGACTATG TCAACTACGT GCAGGAATTC ATCCGCCACC TGCAGGGCAA GTATGGCAAC
TGCCACGTCA TCAGCGTTTG CCAGCCGACC GTGCCGGTGT TCGCAGCCAT TTCGCTGATG
GCCTCCCGCG GGGAAAAAAC CCCGCTGTCC ATGATCATGA TGGGCGGGCC GATTGATGCG
CGCCGCTCGC CAACCGCCGT GAACAACCTG GCCACGACCA AACCCTACGA ATGGTTTGAA
AACAACGTGA TTTACCGCGT TCCTGGCAGT TTCGCAGGCA AGGGCCGGCG CGTTTATCCG
GGCTTTTTGC AGCACACCGG CTTCGTGGCC ATGAACCCCG ACCGGCATGC CTCCAGCCAT
TACGACTACT TCAAGAACCT GATCAAGGGT GACGACGCCA GCACAGAAGC ACACCGCAAG
TTCTACGACG AGTACAACGC CGTCCTCGAC ATGGATGCCG ATTACTACCT CGAAACCATT
AAAACCGTGT TCCAGGATTT CAAGCTGGTC AATGGCACCT GGGATGTGAT GTCTGCGGAA
GGCAAGCTTG AGCGGGTGAA ACCGGGCGAC ATCAAGACCA CCGCCGTGAT GACGGTGGAA
GGTGAGCTGG ATGACATCTC CGGCTCGGGC CAAACCCGGG CCGCACTGGA TATGTGCAGC
GGCGTGGTGC AGGAGCAAAA AACGCACCTG GAAGCCAAGG GTGCAGGCCA TTACGGCATC
TTCAGCGGCC GGCGCTGGCG CGATATCGTC TATCCGGCCG TCAAAGCCTT TATTCTTGAG
CACAACAAGC CTTTTGCGCA GCCGGAGCAA GCGCTTGAAG CTACAAAAAA GATAGCAAAA
TCAGCAAGGG CAGCCAAGGC AGCGGCGCCT GTGACCGTTG AAGCGCCAGC AAAGCCAGCA
TCGGTTGAAG CCGCAAAACC CGTGGCTGGT TTACGCACTG CGGCAGAGGC GGCCAAGCTC
AAGTCAACTG TCGCCCAACT GGTTGCTGAT GCCGAGGAAA AAACCGTTGC CAAGCCAGCA
GAGCCTGTGG CGCAAGCAAT CCAGCCAGCC GATTCATTGA CGGCCACGGA ATCAAAACCA
GCAGCAAAAC CCGTGCTGGT GGCGGTAAAA AACACGACCG CCAAAACCGA AGCTGTCGCT
GAGGCCGCAG CACAAGCTAC GACTGCGCCA GTGGCATCCA CCACGGCAGC GCCTGTTGCT
GCCTCTGAAG CTGCAGCCAA TACCCCGCAG CCCCCTGAAA AGTCAGCCGC CTGA
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| Protein sequence | MLYQLYESQR TLMEPFVDFA QAAAKLYGSP LSPMGKTPLA QRVSAGYSLM YRLGKDYEKP
SFDIHQVDVD KAGVSLAIHE RVEVDKPFCE LRRFKRFTDD SATLTQLKDQ PAVLVVAPLS
GHYSTLLRDT VKTMLKDHKV YITDWKNARN VPLSDGAFHL DDYVNYVQEF IRHLQGKYGN
CHVISVCQPT VPVFAAISLM ASRGEKTPLS MIMMGGPIDA RRSPTAVNNL ATTKPYEWFE
NNVIYRVPGS FAGKGRRVYP GFLQHTGFVA MNPDRHASSH YDYFKNLIKG DDASTEAHRK
FYDEYNAVLD MDADYYLETI KTVFQDFKLV NGTWDVMSAE GKLERVKPGD IKTTAVMTVE
GELDDISGSG QTRAALDMCS GVVQEQKTHL EAKGAGHYGI FSGRRWRDIV YPAVKAFILE
HNKPFAQPEQ ALEATKKIAK SARAAKAAAP VTVEAPAKPA SVEAAKPVAG LRTAAEAAKL
KSTVAQLVAD AEEKTVAKPA EPVAQAIQPA DSLTATESKP AAKPVLVAVK NTTAKTEAVA
EAAAQATTAP VASTTAAPVA ASEAAANTPQ PPEKSAA
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