Gene Pnap_2371 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2371 
Symbol 
ID4688062 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2496363 
End bp2497178 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content63% 
IMG OID639835381 
Producthypothetical protein 
Protein accessionYP_982599 
Protein GI121605270 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.643122 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCTCG AACCCCTGCT GATCGCTGAA CTGGCCGTGC TCGGCGTGGG CACCGGTTTT 
CTGGCCGGCC TGCTGGGCAT TGGCGGCGGC ATGCTGATGG TGCCCTTCAT CACGATCATC
CTGGCCCATC GCGGCGTTTC CGCCGACCTG GCCGTGAAAA TGGCCATTGC CACCTCGATG
GCCACCATCA TCTTTACCTC CCTGTCCAGC GTGCGGGCCC ACCACCGGCG CGGCGCGGTG
CGCTGGGACA TCGTCAAGCG GCTGGCGCCT GGCATTGTCA TGGGCAGCAT CATCGGCAGC
CTGGGCGTGT TCGCGCTGCT CAAAGGGTCT TACCTGGCCA TTTTCTTTGG CCTGTTCGTG
AGCTTTTCCG CAACCCAGAT GTTCCTCGAT AAAAAGCCCA AACCGACGCG CCAAATGCCC
GGCACGGGCG GCCAACTGGC TGCCGGGGGC TTTATCGGCT TCCTGTCGGG ACTGGTCGGC
GCAGGCGGCG GCTTCATCAG CGTGCCCTTC ATGACCTGGT GCAATATCCC GATCCACCAT
GCCGTCGCCA CCTCTGCCGC GCTGGGTTTT CCGATTGCCG TGGCCAATGT GCTGGGCTAC
GCCATCAGCG GGCAAACCGT GCAGAACCTG CCTGAAGGCG CTTTTGGCTA TATCTGGTTG
CCGGCGCTGC TGGTGATTGC CATTTGCAGC GTCCTGACCG CCCCGCTGGG CGCCAGGGCC
GCACACGGCA TTCCGGTCGG CAAGCTCAAG CGGGTGTTCG CCAGCATCCT CTACCTGCTG
GCGGCCTACA TGCTCTACAA GGGGTTGAGC AGTTAA
 
Protein sequence
MILEPLLIAE LAVLGVGTGF LAGLLGIGGG MLMVPFITII LAHRGVSADL AVKMAIATSM 
ATIIFTSLSS VRAHHRRGAV RWDIVKRLAP GIVMGSIIGS LGVFALLKGS YLAIFFGLFV
SFSATQMFLD KKPKPTRQMP GTGGQLAAGG FIGFLSGLVG AGGGFISVPF MTWCNIPIHH
AVATSAALGF PIAVANVLGY AISGQTVQNL PEGAFGYIWL PALLVIAICS VLTAPLGARA
AHGIPVGKLK RVFASILYLL AAYMLYKGLS S