| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2368 |
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| Symbol | |
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| ID | 4687676 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 2493213 |
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| End bp | 2495066 |
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| Gene Length | 1854 bp |
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| Protein Length | 617 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639835378 |
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| Product | TonB-dependent receptor, plug |
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| Protein accession | YP_982596 |
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| Protein GI | 121605267 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | [TIGR01779] TonB-dependent vitamin B12 receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.848515 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACCT GTATTTCCAA CCTGCGCCTG GCCATGCTGC CACTGGCCCT GGCGACCGCA
TTTCCGTCTG CTGCACAAAC ACATCCTGCG CCGCAACTCA AAGAAACCGT CGTCACGGCC
ACCCGCAGCG CCCAGCCCCT GAGCGATGTG GTGGCCGATG TGACCATCAT TGACCGCGAG
CGCATCGAAC GCAGCGGTGC CGCCGGCCTG GCCGATGTGC TCAAGCGCGT TCCCGGGATT
GAAATTTCAC GCAACGGCGG CCCCGGCGCC ACCACCAGCG TGTTCCTGCG CGGCGCCGAG
TCGCGTTTCA CGGCGGTCTA TATCGACGGC GTGCGGGTCG ATTCGCAAGC CACCGGCGGC
GCGGCGTGGG AAACCATTCC GCTGGCGCTG ATTGACCGCA TTGAGGTGCT GCGCGGTCCG
GCCGGCGCGG TGTATGGCTC GGACGCCCTG GGCGGCGTCA TCCAGATCTT CACCAAGCGC
GGCGAACAAG GCTTTGCACC ATTCGTCGGC GTGGGCGTGG GAAGCCACAA CACCCGCAAG
CTGGATGCCG GCTTCAGCGG CGCCAGCGGC GGCTTTGACT ATGCGCTGGG CGTGGCGCGC
GAAATCAGCC ATGGATTTGA CTCGCAGCCG CAGCGTTTGA GCAACTCCGC TACACCGCTC
AGCAATCCCG ATCAAGACGG CTACCGCAGT ACATCGGCCA ATGCCCGTCT GGGCTTCAAG
ATCAACCGTG CCCATAGCCT GGACGCCACG CTGCTGTACA GCGACATGAA ATCCCACTAC
GACGCCTTCG GCTACAGTCC CGCCAGGCCG GTCGATGACC TCAGCCTGCA CAAGCTGCAT
GCGCTGGGCT TGAACTGGCA GGCGCAGTGG ACCGACGCCT ACAGCACCCG GCTGAGCATG
ACCGAATCAG AGGACCGCTA CGAAACCACG CCCTCGCCCT ACCAGACGAC CACCCGGCTG
CGCGGCTACA CGCTGCAAAA CGAGTTCCGC CTGGGCGCGC ACCTTTTCAC CGCCGCCCTT
GAACGCAAGG AAGACCATCT GAAGAATGCG CCCATCGACC AGGGCCGTTC GCAAAATGCC
GTGGCGCTGG GTTATGGCTT CACTGAAAAG AGCCACACCG TCCAGCTCAA TGTGCGGCAT
GACAAGGACA GCGAATTTGG CGGCAAGACC ACCGGCAGCG CCGCCTATGC CTATGCCTTC
ACGCCCGAAT GGCGCGCCTC GGCCTCGGCG GGAACGGCTT TCCGGGCGCC GACGCTGTAC
CAGCGCTTCA GCGAGTACGG CGTGGCGACG CTGGTGCCTG AGAGCAGCCG CAACCTGGAA
CTGGGCCTGC GCTGGTCGCA GGGCGCCAGC AGCGCCGGGC TGGTGGCTTA CCGGAACAAG
GTCGATAACC TTATTTCCTT TGTTGGCGCG GGCACCTGTG CCTCGCCATT CGGCTGCTAC
GCCAACACGG CGCGCGCCGA GTATTCTGGC GCCACGCTGA CGGCCTCGCA TGCCGTGGGC
GGCGTGAACC TGGCGGCTTC GCTCGATCTG CAAAATCCGC GCGATCTGAA TACCGGCAAG
CAACTGGCGC GCCGCGCCAG GCAGCACGGC CTGCTTTCCG CCGACATGCG GGTGGGAAGC
TGGCTGCTGG GCGCCGAAGC GCAGTTCTCG GGCAAGCGCT TTGACGATGC CGCCAACACC
AGGGTGCTGA GCGGCTACAG CCTGCTGAAC CTGAACGCCA GCACGCCGCT CGCCAAGGAC
TGGACCTTGC TGGCCCGGGT GGACAACCTG GCCGACAAGC AGTACGAACT GGCCCGCAGC
TATGCGACGG CCGGGCGTTC GTTCTACGTC GGCGTGAAGT GGGCGCCCCT GTAA
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| Protein sequence | MKTCISNLRL AMLPLALATA FPSAAQTHPA PQLKETVVTA TRSAQPLSDV VADVTIIDRE
RIERSGAAGL ADVLKRVPGI EISRNGGPGA TTSVFLRGAE SRFTAVYIDG VRVDSQATGG
AAWETIPLAL IDRIEVLRGP AGAVYGSDAL GGVIQIFTKR GEQGFAPFVG VGVGSHNTRK
LDAGFSGASG GFDYALGVAR EISHGFDSQP QRLSNSATPL SNPDQDGYRS TSANARLGFK
INRAHSLDAT LLYSDMKSHY DAFGYSPARP VDDLSLHKLH ALGLNWQAQW TDAYSTRLSM
TESEDRYETT PSPYQTTTRL RGYTLQNEFR LGAHLFTAAL ERKEDHLKNA PIDQGRSQNA
VALGYGFTEK SHTVQLNVRH DKDSEFGGKT TGSAAYAYAF TPEWRASASA GTAFRAPTLY
QRFSEYGVAT LVPESSRNLE LGLRWSQGAS SAGLVAYRNK VDNLISFVGA GTCASPFGCY
ANTARAEYSG ATLTASHAVG GVNLAASLDL QNPRDLNTGK QLARRARQHG LLSADMRVGS
WLLGAEAQFS GKRFDDAANT RVLSGYSLLN LNASTPLAKD WTLLARVDNL ADKQYELARS
YATAGRSFYV GVKWAPL
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