Gene Pnap_2345 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2345 
SymbolnifH 
ID4687210 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2476797 
End bp2477687 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content59% 
IMG OID639835355 
Productnitrogenase reductase 
Protein accessionYP_982573 
Protein GI121605244 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1348] Nitrogenase subunit NifH (ATPase) 
TIGRFAM ID[TIGR01287] nitrogenase iron protein 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.383855 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAAAC TTCGGCAAAT CGCCTTTTAC GGCAAAGGTG GCATCGGTAA ATCGACCACT 
TCCCAAAACA CCCTGGCGGC CCTGTCCGAC CTCGGTCAGA AAATCCTGAT CGTCGGCTGC
GACCCCAAGG CCGACTCGAC CCGCCTGATC CTTCACGCAA AAGCCCAGGA CACCATCCTG
TCGCTGGCCG CTGAAGCCGG ATCCGTGGAG GATCTGGAAC TCGAAGACGT CATGAAAATC
GGCTACAAGG ACATCCGCTG CGTCGAGTCC GGCGGCCCAG AGCCAGGAGT TGGCTGCGCT
GGCCGCGGTG TCATCACCTC GATCAACTTC CTTGAAGAAA ACGGTGCCTA CGACGGCGTT
GACTATGTTT CCTACGACGT GCTGGGCGAC GTGGTGTGCG GCGGTTTCGC CATGCCCATC
CGCGAAAACA AGGCGCAGGA AATCTACATC GTCATGTCCG GCGAAATGAT GGCCATGTAC
GCCGCCAACA ACATCTCCAA GGGCATTTTG AAGTATGCCA ATTCGGGTGG TGTGCGTCTG
GGCGGCCTGG TCTGCAACGA GCGCCAGACC GACAAGGAAT ACGAACTGGC TGACGCCCTG
TCCGGCATGC TGGGCACCAA GCTGATCCAC TTCATCCCAC GCGACAACGT CGTTCAGCAC
GCTGAACTGC GCCGCATGAC GGTGATCGAG TACGCACCTG ACTCCAAGCA GGCCGGCGAA
TACCGCACCC TGGCTTCGAA GATCCACAAC AACGCTGGCA ACGGCACGAT CCCTACCCCG
ATCACGATGG ATCAGCTCGA AGACATGCTG ATGGAATTCG GCATCATGGA AGCGATTGAC
GAGTCGGAAG TCGGCAAGGC CGCCGCCGCA GCCGCAGCCT TGGCTGCCTA A
 
Protein sequence
MAKLRQIAFY GKGGIGKSTT SQNTLAALSD LGQKILIVGC DPKADSTRLI LHAKAQDTIL 
SLAAEAGSVE DLELEDVMKI GYKDIRCVES GGPEPGVGCA GRGVITSINF LEENGAYDGV
DYVSYDVLGD VVCGGFAMPI RENKAQEIYI VMSGEMMAMY AANNISKGIL KYANSGGVRL
GGLVCNERQT DKEYELADAL SGMLGTKLIH FIPRDNVVQH AELRRMTVIE YAPDSKQAGE
YRTLASKIHN NAGNGTIPTP ITMDQLEDML MEFGIMEAID ESEVGKAAAA AAALAA