Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_2345 |
Symbol | nifH |
ID | 4687210 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 2476797 |
End bp | 2477687 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639835355 |
Product | nitrogenase reductase |
Protein accession | YP_982573 |
Protein GI | 121605244 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1348] Nitrogenase subunit NifH (ATPase) |
TIGRFAM ID | [TIGR01287] nitrogenase iron protein |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.383855 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAAAC TTCGGCAAAT CGCCTTTTAC GGCAAAGGTG GCATCGGTAA ATCGACCACT TCCCAAAACA CCCTGGCGGC CCTGTCCGAC CTCGGTCAGA AAATCCTGAT CGTCGGCTGC GACCCCAAGG CCGACTCGAC CCGCCTGATC CTTCACGCAA AAGCCCAGGA CACCATCCTG TCGCTGGCCG CTGAAGCCGG ATCCGTGGAG GATCTGGAAC TCGAAGACGT CATGAAAATC GGCTACAAGG ACATCCGCTG CGTCGAGTCC GGCGGCCCAG AGCCAGGAGT TGGCTGCGCT GGCCGCGGTG TCATCACCTC GATCAACTTC CTTGAAGAAA ACGGTGCCTA CGACGGCGTT GACTATGTTT CCTACGACGT GCTGGGCGAC GTGGTGTGCG GCGGTTTCGC CATGCCCATC CGCGAAAACA AGGCGCAGGA AATCTACATC GTCATGTCCG GCGAAATGAT GGCCATGTAC GCCGCCAACA ACATCTCCAA GGGCATTTTG AAGTATGCCA ATTCGGGTGG TGTGCGTCTG GGCGGCCTGG TCTGCAACGA GCGCCAGACC GACAAGGAAT ACGAACTGGC TGACGCCCTG TCCGGCATGC TGGGCACCAA GCTGATCCAC TTCATCCCAC GCGACAACGT CGTTCAGCAC GCTGAACTGC GCCGCATGAC GGTGATCGAG TACGCACCTG ACTCCAAGCA GGCCGGCGAA TACCGCACCC TGGCTTCGAA GATCCACAAC AACGCTGGCA ACGGCACGAT CCCTACCCCG ATCACGATGG ATCAGCTCGA AGACATGCTG ATGGAATTCG GCATCATGGA AGCGATTGAC GAGTCGGAAG TCGGCAAGGC CGCCGCCGCA GCCGCAGCCT TGGCTGCCTA A
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Protein sequence | MAKLRQIAFY GKGGIGKSTT SQNTLAALSD LGQKILIVGC DPKADSTRLI LHAKAQDTIL SLAAEAGSVE DLELEDVMKI GYKDIRCVES GGPEPGVGCA GRGVITSINF LEENGAYDGV DYVSYDVLGD VVCGGFAMPI RENKAQEIYI VMSGEMMAMY AANNISKGIL KYANSGGVRL GGLVCNERQT DKEYELADAL SGMLGTKLIH FIPRDNVVQH AELRRMTVIE YAPDSKQAGE YRTLASKIHN NAGNGTIPTP ITMDQLEDML MEFGIMEAID ESEVGKAAAA AAALAA
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