Gene Pnap_2343 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2343 
Symbol 
ID4686247 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2473589 
End bp2475148 
Gene Length1560 bp 
Protein Length519 aa 
Translation table11 
GC content60% 
IMG OID639835353 
Productnitrogenase molybdenum-iron protein beta chain 
Protein accessionYP_982571 
Protein GI121605242 
COG category[C] Energy production and conversion 
COG ID[COG2710] Nitrogenase molybdenum-iron protein, alpha and beta chains 
TIGRFAM ID[TIGR01286] nitrogenase molybdenum-iron protein beta chain 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.303723 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCAAT CAGCCGACAA GATTCTCGAC CACGAACTGC TGTTCCGTGA GCCCGAGTAC 
CAAGAGATTT TCCGCAGCAA GAAAGCGGAC TTCGAGTTCA ACCATTCCGA CGAGACGGTC
AAGCAGATCG TCGAATGGAC CAAGACCGAA GACTACAAGC AAAAGAACTT CGCCCGCGAT
TCGCTGAGCG TGAATCCGGC CAAGGCCTGT CAGCCGCTGG GCGCTGTGTT TGTCGCCAAC
GGCTTTGCCA AGACGCTGAG CTTCGTTCAC GGCAGCCAGG GCTGCGTGGC TTACTACCGC
TCGCACTTCT CGCGTCACTT CAAGGAGCCA ACGTCCTGCG TCAGCTCCTC GATGACCGAA
GATGCAGCCG TGTTCGGCGG CCTGAACAAC ATGGTCGATG GCCTGTCCAA CGCCTACAGC
CTGTACAAGC CCGACATGAT TGCTGTCTCG ACCACCTGCA TGGCCGAAGT GATTGGTGAC
GACGTTGACG CCTTCATCAA GACCAGCAAG CAAAAAGGCA GCGTGCCCGA CGACTTCGAC
GTGCCGTTCG CCCACACGCC AGCGTTCGTC GGCAGCCACA TCACCGGCTA CGACAATGCG
CTGCTGGGCA TCCTGCGCCA CTTCTGGGAC GGCAAGGCCA AGACCACCGA ACCGCTGGTA
CGCGTGGAAG ATGAAAGCAT CAACTTCATC GGCGGCTTTG ACGGCTATGT CGTCGGCAAC
ATGAAGGAAA TCCGCCGGAT TTTCAGCCTG TTCGGCGTCA AGGTCAACAT CATCTGCGAC
CCGTCCGGCA ACTGGAACAC GCCCACCGAC GGCGAGTTCC GCATGTACGC CGGCGGCACC
ACGAAGGAAG AAGTGCAGGC TGCATTGCAT GCCAAGGCGA CCATCGTGTT CCAGGAATAC
TGCTGCGAGA AAACCAGCAA GTTCATCCGT GAGCATGGCC AGGAAGTCGT CGCACTGAAT
GCGCCCGTGG GCGTGGCCGG CACCGACCAG TTCCTGATGG AAATCTCGCG CCTGACCGGC
AAGCCGATTC CCGCCGAACT CGAAAAAGAG CGCGGCGAAC TGGTGGACGC CATGGCCGAC
AGCCAAGCCC ACCTGCACGG CAAGCGCTTC GCACTGTATG GTGATCCTGA CCAGATGCTG
GGCTACGCTG GATTCCTGCT GGAACTCGGC GCCGAACCCT CGCATGTGCT GGCCACCAAC
GGCACCGAAC CCTGGGCCAA GAAGGTTCAG GCGCTGTTCG ACTCGTCGCC TTACGGCGCG
GGCTGCAAGG TGTATCCGAA ACGCGATTTG TGGCACCTGC GTTCGCTGAT GTTCACCGAG
CCGGTGGACT TCCTGATCGG CAACACCTAC GGCAAGTACC TGGAGCGCGA CACCGCGACG
CCGCTGATCC GCATGGTGTT CCCGATTTTT GATCGCCACC ACTACCACCG TTTCCCCACC
TGGGGCTACG AAGGCGGCAT GCGCGTCCTG GTGACCTTGC TCGATGAGTT CTTCGAAGCG
CTCGATGCCA ACACCATCGT TCCGGGCAAG ACCGACTACA GCTACGACAT CATCCGTTGA
 
Protein sequence
MPQSADKILD HELLFREPEY QEIFRSKKAD FEFNHSDETV KQIVEWTKTE DYKQKNFARD 
SLSVNPAKAC QPLGAVFVAN GFAKTLSFVH GSQGCVAYYR SHFSRHFKEP TSCVSSSMTE
DAAVFGGLNN MVDGLSNAYS LYKPDMIAVS TTCMAEVIGD DVDAFIKTSK QKGSVPDDFD
VPFAHTPAFV GSHITGYDNA LLGILRHFWD GKAKTTEPLV RVEDESINFI GGFDGYVVGN
MKEIRRIFSL FGVKVNIICD PSGNWNTPTD GEFRMYAGGT TKEEVQAALH AKATIVFQEY
CCEKTSKFIR EHGQEVVALN APVGVAGTDQ FLMEISRLTG KPIPAELEKE RGELVDAMAD
SQAHLHGKRF ALYGDPDQML GYAGFLLELG AEPSHVLATN GTEPWAKKVQ ALFDSSPYGA
GCKVYPKRDL WHLRSLMFTE PVDFLIGNTY GKYLERDTAT PLIRMVFPIF DRHHYHRFPT
WGYEGGMRVL VTLLDEFFEA LDANTIVPGK TDYSYDIIR