Gene Pnap_2330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2330 
Symbol 
ID4687023 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2465229 
End bp2466044 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content66% 
IMG OID639835340 
ProductH+-transporting two-sector ATPase, B/B' subunit 
Protein accessionYP_982558 
Protein GI121605229 
COG category[C] Energy production and conversion 
COG ID[COG0711] F0F1-type ATP synthase, subunit b 
TIGRFAM ID[TIGR01144] ATP synthase, F0 subunit b
[TIGR01145] ATP synthase, F1 delta subunit
[TIGR03321] alternate F1F0 ATPase, F0 subunit B 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCTTTG ACTGGTTCAC CGTCGGCGCG CAAGCGCTCA ACTTTCTCAT CCTGGTGTGG 
CTGATGAAGC GCTTTCTCTA CAAGCCCATC CTCGACGCCA TCGACGCGCG CGAGAAGCGG
ATTGCTTCGG CGCTGGCGGA CGCTGCCTTG AAGCAGGCCA CTGCCCAGAA GGAGCAGGGC
GAGTTCCAGG CAAAAAACGC GGCGTTTGAT CGCCAGCACA GCGAGATGCT GGCCAAGGTC
AAGGACGAGA TCGCCACCGA ACGCCAGCGC CTGCTCGAAG ACGCCCGGCA GGCGGCGGAC
GCCTTGAGCG TCAAGCGGCA GGACGCGCTG GCCAGCGAGC TGCAGAGCCT GCACCAGGAC
ATCGCCCGCC GAAGCCGCGA TGAAGTGTTT GCCGTGGCGC ACAAGGTGCT GGCCGATCTG
GCCGGGACCA CGCTGGAGGC ACGCATGGCC GAGGTGTTCG TGCGCCGCCT GCGAACGCTT
GACGAGGAGG CCAGGGCGCG GCTGGCCCGG GCCTTGCAAG CTTCACCCAG TCCTGTGCGG
GTGCGCAGCG TTTTCGAGCT GCCGCCGGCG CAGCGGGCGG CCCTGCAGCA GGCGCTCAAT
GAAACCCTCG CGGCGGATAC CCAGGTCTGC TTCGAGACCA CGCCAGCGCT GATCAGCGGC
ATCGAACTGA CCGCCAACGG GTGGAAGCTT GACTGGAACA TCGCGGAGGT TCTTGCGTCG
CTCGAACAGC ATGTTGACGG CCTGCTTGAA AAGCCGTCCG AACCTCAACG CCAGCCCGAG
CCCGCCGCCG CAACAGCAGC AGAGACAACC GCATGA
 
Protein sequence
MLFDWFTVGA QALNFLILVW LMKRFLYKPI LDAIDAREKR IASALADAAL KQATAQKEQG 
EFQAKNAAFD RQHSEMLAKV KDEIATERQR LLEDARQAAD ALSVKRQDAL ASELQSLHQD
IARRSRDEVF AVAHKVLADL AGTTLEARMA EVFVRRLRTL DEEARARLAR ALQASPSPVR
VRSVFELPPA QRAALQQALN ETLAADTQVC FETTPALISG IELTANGWKL DWNIAEVLAS
LEQHVDGLLE KPSEPQRQPE PAAATAAETT A