Gene Pnap_2325 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2325 
Symbol 
ID4687799 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2459297 
End bp2460805 
Gene Length1509 bp 
Protein Length502 aa 
Translation table11 
GC content63% 
IMG OID639835336 
Productnitrogenase molybdenum-cofactor biosynthesis protein NifE 
Protein accessionYP_982554 
Protein GI121605225 
COG category[C] Energy production and conversion 
COG ID[COG2710] Nitrogenase molybdenum-iron protein, alpha and beta chains 
TIGRFAM ID[TIGR01283] nitrogenase molybdenum-iron cofactor biosynthesis protein NifE 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGTCT CGCTCAAGGC CAAGATCGCT GAAGTGTTCG AAGAACCGGG CTGTGACAAG 
AACCAGGGCA AGACCGAGAA AGAACGCAAG AAGGGTTGCA CCAAGCAGCT CAACCCCGGC
GCCGCAGCCG GTGGTTGCGC CTTTGATGGC GCCAAGATCG CGCTGCAGCC GGTGGTCGAT
GTCGCCCATC TGGTCCACGG GCCGATTGCC TGCGAGGGCA ATTCCTGGGA CAACCGGCAC
AGCGCTTCGT CCGGCTCGCA GCTTTACCGC ACCGGCTTCA CCACCGACAT CAACGAGCTG
GACGTGATCT ACGGCGGCGA AAAGCGCCTG TTCAAGTCCA TCCGCGAGAT CATCGACAAA
TACGACCCGC CGGCAGTCTT TGTGTACCAG ACCTGCGTGA CCGCGCTGGT CGGCGACGAC
ATTGAAGCGG TGTGCCAGCG CGCCACCGAA AAATTCGGCA AGCCCATCAT TCCGGTCAAC
GCCCCCGGTT TTGCCGGCCC CAAGAACCTG GGCAACAAGC TCGGCGCAGA AGCCCTGCTG
GACTACGTGA TCGGCACCGT CGAGCCCGAG TTCACCACGC CTTACGACAT CAACATCATC
GGCGAATACA ACCTGGTCGG CGAGCTGTGG CAGGTCAAGC CGCTGCTCGA CGCGCTGGGC
ATCCGCATCC TGTCGTGCAT CTCGGGCGAC GGCCGCTACA ACGAGGTTGC CAGCGCGCAC
CGGGCCAAGG TGAACATGAT GGTCTGCTCC AAGTCGATGA TCAACATCGC CACCAAGATG
GAGCAGCGCT GGGGCATTCC CTACTTTGAA GGCTCGTTCT ACGGCATTGG CGACATGAGC
GACACGCTGC GCCAGATCGC CACGCTGCTG GTCAAGCAGG GCGCACCGGC TGATTTGCTG
GAGCGCACCG AACGCCTGAT TGCCGTCGAA GAGGCCAGGG CCTGGGAGCG CATCGCGCAT
TACAAGACGC GCCTGACGGG CAAGCGGGCG CTGCTGATCA CCGGCGGCGT CAAGTCCTGG
TCGGTCGTTG CCGCGCTGCA GGAAGCGGGC ATCGAGATTG CCGGCACCAG CGTCAAGAAG
AGCACCAAGG AAGACAAGGA AAAAATCAAG GAAATCATGG GCGACGACGC CCACATGATC
GACGACATGA CGCCGCGCGA GATGTACAAC ATGCTGCGCG ACGCAAGGGC CGACATCATG
CTGTCGGGTG GGCGCTCGCA GTTCGTCGCG CTCAAGGCGC GCATGCCCTG GCTGGACATC
AACCAGGAGC GCCATCACCC CTACGGCGGC TACGAAGGCA TGGTCGAGCT GGTGCGCGAA
ATCGACCGGG CGATCTACAA CCCGGTATGG CAGCAGGTGC GCATTCCCGC ACCCTGGGGC
GACGACGGCG AAACCCTGGG CGCCGTGCCG ACGGCGGCCA TCCCCGAAGT TCCGGCTCAA
GGCATGGGTT TTCTGGCCGA CATCGCTGCC AAGGCGATGG GCCTGGAGCC CGAAGAAATT
CCGGTCTGA
 
Protein sequence
MSVSLKAKIA EVFEEPGCDK NQGKTEKERK KGCTKQLNPG AAAGGCAFDG AKIALQPVVD 
VAHLVHGPIA CEGNSWDNRH SASSGSQLYR TGFTTDINEL DVIYGGEKRL FKSIREIIDK
YDPPAVFVYQ TCVTALVGDD IEAVCQRATE KFGKPIIPVN APGFAGPKNL GNKLGAEALL
DYVIGTVEPE FTTPYDINII GEYNLVGELW QVKPLLDALG IRILSCISGD GRYNEVASAH
RAKVNMMVCS KSMINIATKM EQRWGIPYFE GSFYGIGDMS DTLRQIATLL VKQGAPADLL
ERTERLIAVE EARAWERIAH YKTRLTGKRA LLITGGVKSW SVVAALQEAG IEIAGTSVKK
STKEDKEKIK EIMGDDAHMI DDMTPREMYN MLRDARADIM LSGGRSQFVA LKARMPWLDI
NQERHHPYGG YEGMVELVRE IDRAIYNPVW QQVRIPAPWG DDGETLGAVP TAAIPEVPAQ
GMGFLADIAA KAMGLEPEEI PV