| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2310 |
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| Symbol | |
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| ID | 4687767 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 2448960 |
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| End bp | 2450147 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639835321 |
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| Product | homocitrate synthase |
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| Protein accession | YP_982539 |
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| Protein GI | 121605210 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR02660] homocitrate synthase NifV |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCTCA ATCTCATCAT CAACGACACC ACCTTGCGCG ACGGCGAACA GACCGCCGGG
GTGGCTTTTA CCGTCGATGA GAAATGCGCC ATCGCCTGCG CGCTGGCCGC AGCCGGCGTG
CCGGAAATGG AAATCGGCAT CCCCGCCATG GGCGAGGAAG AAATCGACTG CATCAACACC
ATTGCGGCGC TGGAGCTTCC CGCTGCCCTG ATGATCTGGG GGCGCCTCAC CGATGCCGAT
CTGGCCAGCG CGCTGCGCTG CCAGGCCGAC ATCATCCACC TGTCGATTCC GGTGTCCGAC
ATCCACCTTC GCCACAAGCT GCGCCAGTCG CGCGAGTGGG TCCTGGCCCA GGTCACGCGG
GTGATTGAAA AGGCCGTGGC CAGCGGCCGC AAGATTTCGC TGGGCGCTGA AGATGCGTCG
CGCGCCGACG CCGGTTTTCT CTCGCAGGTC GCCCGGCGCG CCCAGGACTG CGGCGCCAGC
CGCATCCGCT TTGCCGACAC GCTGGGCGTG CTCGACCCGT TCACGACTTA TGAGGCCATC
ACCCGGCTGC GCGAAGCGGT ACACCTGGAC ATCGAGATTC ACGCGCACAA CGACCTCGGG
CTGGCCACCG CCAACACGCT GGCCGCCCTG CGCGCCGGCG CCACGCATGC CAACACCACC
GTCAACGGCC TGGGCGAGCG CGCCGGCAAT GCGGCGCTCG AAGAAGTCGT GATGGGCGTG
CGCCACCTGC ACCATGCGCA AACCGGCGTC AGCACGCAGG CGCTGGTTTC CATTTCACGC
CTGGTGGCCA GAGCCTCGGG GCGCCAGGTG GCCTTCAACA AAAGCATCGT CGGCGAGGCG
GTGTTCACCC ACGAGTCCGG CATTCACATC GACGGCCTGC TGAAAAACGC TTCGACCTAC
GAGAGTTTTG ACCCTTCCGA ACTGGGCCGC GAGCGGCGCA CGGTGCTGGG CAAGCATTCG
GGTTCGCAGT CGGTGCGCCA GGCTTACGGC GCGATGGGCG TGGTGCTGGA CGACGATGCG
CTGACCGGCC GCGTGCTGGC GCGCATCCGC GACCATGCCA TGCGCGTCAA GCAGGAAGCC
ACGCCGGACG AGCTGCGCGG CTTTCTGCGC GACTCGCATC TGCCGCATCC GCCGAATCTG
CCATTTGCAC CGTTCACCGC TGACACGGTG GCCTTGGGCC AGGCATGA
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| Protein sequence | MPLNLIINDT TLRDGEQTAG VAFTVDEKCA IACALAAAGV PEMEIGIPAM GEEEIDCINT
IAALELPAAL MIWGRLTDAD LASALRCQAD IIHLSIPVSD IHLRHKLRQS REWVLAQVTR
VIEKAVASGR KISLGAEDAS RADAGFLSQV ARRAQDCGAS RIRFADTLGV LDPFTTYEAI
TRLREAVHLD IEIHAHNDLG LATANTLAAL RAGATHANTT VNGLGERAGN AALEEVVMGV
RHLHHAQTGV STQALVSISR LVARASGRQV AFNKSIVGEA VFTHESGIHI DGLLKNASTY
ESFDPSELGR ERRTVLGKHS GSQSVRQAYG AMGVVLDDDA LTGRVLARIR DHAMRVKQEA
TPDELRGFLR DSHLPHPPNL PFAPFTADTV ALGQA
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