Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_2306 |
Symbol | |
ID | 4686362 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 2446087 |
End bp | 2446554 |
Gene Length | 468 bp |
Protein Length | 155 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639835317 |
Product | UspA domain-containing protein |
Protein accession | YP_982535 |
Protein GI | 121605206 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTACCAGC GAATACTTGT TCCGGTTGAC GGCAGCGAAA CCGCCAACAA GGCCTTGGTC GCCGCCCTGC AACTGGCCCG GGAATCGGGT GGCCGCGTGC GGCTCATCCA TGTGCTTGAA GAGCTGGCCT ACCTGACCGG CTACGAGCAG TACGGCGCTT ATTCGGGCGA GTTGATCACG GCCATGCGCG ACACCGGAGC CAAAATACTC GATGACGCCC TGGCGGTCGC CCAGTCGGCG GGCGTGCCGG CCGACAGCCT GCTGTGCGAT AAGCTGGGCG ACCGGCTGGC CGAAGCGGTC GCCGATGCCG CGAAGCAATG GAAGGCCGAC CTTGTCGTCG TCGGCACCCA CGGCCGGCGC GGCATCGGCC GTGTGCTGCT GGGCAGTGGC GCCGAGCAAA TCCTGCGACT GGCGCAGGTG CCGGTGCTGG TGATTCGCTC GGGCGAGAGC GCCAGCCCGG CGGCTTGA
|
Protein sequence | MYQRILVPVD GSETANKALV AALQLARESG GRVRLIHVLE ELAYLTGYEQ YGAYSGELIT AMRDTGAKIL DDALAVAQSA GVPADSLLCD KLGDRLAEAV ADAAKQWKAD LVVVGTHGRR GIGRVLLGSG AEQILRLAQV PVLVIRSGES ASPAA
|
| |