Gene Pnap_2305 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2305 
Symbol 
ID4687022 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2445028 
End bp2445954 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content66% 
IMG OID639835316 
ProductUspA domain-containing protein 
Protein accessionYP_982534 
Protein GI121605205 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGCTGG TTGATGTTTC TCAAGCCGCA GCGGATGGCG AGCTAATAAG GTTGCCCTAT 
TGCAACTTGT TGACGGAGTC CGCCATGAAT GCTTCCTTTG CACAGCTATT GGTACACCTT
GATGCCTCGC CGCAGGCGGT TCAACGCCTG GAGGCAGCGC GTCGGATCGG ACAGGCGCAA
GGCGCCGCAG TGACTGCCCT GTATGCCGTC ACGCCCCATT TCGTGGAACT GCCGTTTTCA
CCGGAAATCG GACCGGGCAT CGCGGCGTCC CTGCGCGGGA TTGATGATGC CTTGCGCGAC
CGGGCGCGCG TCGTGTTCGA GCAGTCGCTG GCGACGCCGG GCGTCGCCAT GGCATGGGCC
GAGGTTCGCT CCGACCCGAT CATGGCGGCG TTCGCGCAGC AGGCTTTCTA TGCCGACCTG
CTGGTGCTGG GCCAGCACAA CCCTTTCAGT GCGTCATCGT CCGGCGTGCC GCCGGATTTT
GCCGCGAACG CGATGCTCAT GAGCGGCAAG CCGGCCCTGA TCCTGCCGTA TGTCGGCGCG
CTGCCCGGCG TGATTGGCGA CACTGTCGTG ATTGCCTGGA AACCCGCCCG CGAGGCGGCC
CGTGCCGTGA GCGCTGCCAT GCCTTTGCTC AAGCGCGCGC GGCGCGTCGT CATTCTTTCG
TGGTCCGGCG ACGATGAGCC GGTTGAAGGC GGCCGGCTGG ACCTGAACGG CTACCTGCGG
CTGCACGGCG TCGAGGCGAC CTGGCAGCGC GAGGGGGCCG AGCCCGATGC ACTGGGCGAA
TTGCTGCTCT CGCGCGCCTT CGATCTCGGG GCCGACCTGC TGGTGATGGG CTGCTATGGC
CACAGCCGGG CGCGCGAGTG GGTGTTGGGC GGCACCTCGC GCACGGTGCT GGAGTCCATG
ACGCTGCCGG TGCTGATGGT GCATTGA
 
Protein sequence
MGLVDVSQAA ADGELIRLPY CNLLTESAMN ASFAQLLVHL DASPQAVQRL EAARRIGQAQ 
GAAVTALYAV TPHFVELPFS PEIGPGIAAS LRGIDDALRD RARVVFEQSL ATPGVAMAWA
EVRSDPIMAA FAQQAFYADL LVLGQHNPFS ASSSGVPPDF AANAMLMSGK PALILPYVGA
LPGVIGDTVV IAWKPAREAA RAVSAAMPLL KRARRVVILS WSGDDEPVEG GRLDLNGYLR
LHGVEATWQR EGAEPDALGE LLLSRAFDLG ADLLVMGCYG HSRAREWVLG GTSRTVLESM
TLPVLMVH