Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_2305 |
Symbol | |
ID | 4687022 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 2445028 |
End bp | 2445954 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639835316 |
Product | UspA domain-containing protein |
Protein accession | YP_982534 |
Protein GI | 121605205 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGGCTGG TTGATGTTTC TCAAGCCGCA GCGGATGGCG AGCTAATAAG GTTGCCCTAT TGCAACTTGT TGACGGAGTC CGCCATGAAT GCTTCCTTTG CACAGCTATT GGTACACCTT GATGCCTCGC CGCAGGCGGT TCAACGCCTG GAGGCAGCGC GTCGGATCGG ACAGGCGCAA GGCGCCGCAG TGACTGCCCT GTATGCCGTC ACGCCCCATT TCGTGGAACT GCCGTTTTCA CCGGAAATCG GACCGGGCAT CGCGGCGTCC CTGCGCGGGA TTGATGATGC CTTGCGCGAC CGGGCGCGCG TCGTGTTCGA GCAGTCGCTG GCGACGCCGG GCGTCGCCAT GGCATGGGCC GAGGTTCGCT CCGACCCGAT CATGGCGGCG TTCGCGCAGC AGGCTTTCTA TGCCGACCTG CTGGTGCTGG GCCAGCACAA CCCTTTCAGT GCGTCATCGT CCGGCGTGCC GCCGGATTTT GCCGCGAACG CGATGCTCAT GAGCGGCAAG CCGGCCCTGA TCCTGCCGTA TGTCGGCGCG CTGCCCGGCG TGATTGGCGA CACTGTCGTG ATTGCCTGGA AACCCGCCCG CGAGGCGGCC CGTGCCGTGA GCGCTGCCAT GCCTTTGCTC AAGCGCGCGC GGCGCGTCGT CATTCTTTCG TGGTCCGGCG ACGATGAGCC GGTTGAAGGC GGCCGGCTGG ACCTGAACGG CTACCTGCGG CTGCACGGCG TCGAGGCGAC CTGGCAGCGC GAGGGGGCCG AGCCCGATGC ACTGGGCGAA TTGCTGCTCT CGCGCGCCTT CGATCTCGGG GCCGACCTGC TGGTGATGGG CTGCTATGGC CACAGCCGGG CGCGCGAGTG GGTGTTGGGC GGCACCTCGC GCACGGTGCT GGAGTCCATG ACGCTGCCGG TGCTGATGGT GCATTGA
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Protein sequence | MGLVDVSQAA ADGELIRLPY CNLLTESAMN ASFAQLLVHL DASPQAVQRL EAARRIGQAQ GAAVTALYAV TPHFVELPFS PEIGPGIAAS LRGIDDALRD RARVVFEQSL ATPGVAMAWA EVRSDPIMAA FAQQAFYADL LVLGQHNPFS ASSSGVPPDF AANAMLMSGK PALILPYVGA LPGVIGDTVV IAWKPAREAA RAVSAAMPLL KRARRVVILS WSGDDEPVEG GRLDLNGYLR LHGVEATWQR EGAEPDALGE LLLSRAFDLG ADLLVMGCYG HSRAREWVLG GTSRTVLESM TLPVLMVH
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